LOCUS BG067365 800 bp mRNA linear EST 12-MAY-2010
DEFINITION H3053F01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3053F01 3', mRNA sequence.
ACCESSION BG067365
VERSION BG067365.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 800)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG067365.1.
Other_ESTs: H3053F01-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3053 row: F column: 01
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..800
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3053F01-3"
/db_xref="taxon:10090"
/clone="H3053F01"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 196 a 206 c 186 g 212 t
ORIGIN
1 attaggaatg tcttcagtcc atggatcaga acagtccagg ttccaaggta tccttagtcc
61 ctcagccaca gaacaaaacc ttcttccttt caggagttaa ctttgcatgg ggttgggatt
121 tagaacctgg aaaggctcag cagcaggagg aggataaagg tggggtctgt cacctctctc
181 cctccagtgc attcctagag aggaatgtgg aaggaagtgt tcccttagcc tcactccaag
241 gaactctaaa caagtcttct ccaggcttgc tccccatcct accttctcca gcaggctgtt
301 ttctggcttg tatcaccctt agagtttcat aattcatcat gttctggtct cccaggaaag
361 caggtcacgg gactagaaca ggatcactaa agctttccag ttcatttctt tagtgccccc
421 gaaggtgaag gtctatgcat tcattcacat catggatgct ccatcctccc agcagggggt
481 cagtgcagtc agtcaccact ggaagaagat ggaagggttt cctcagcctc tgaccttgtc
541 tcatccccac ttagcagcca gctgtggaaa cttagtccct ctgttttctg cattgttata
601 gagggacagt gaggtcctct ctgcccatgc atggttggaa gatggctcag agtctgtgca
661 gttcagtctt caaactcttc caggcacaga agtgctgatg taggatggca gagtgagctg
721 ttcagtcaag attggcagtc cattagcaat gatctctcta catccacgac aggcacccca
781 agttctcaaa aaagtcaaca
//