LOCUS BG067364 811 bp mRNA linear EST 12-MAY-2010 DEFINITION H3053E12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3053E12 3', mRNA sequence. ACCESSION BG067364 VERSION BG067364.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 811) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067364.1. Other_ESTs: H3053E12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3053 row: E column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..811 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3053E12-3" /db_xref="taxon:10090" /clone="H3053E12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 219 a 200 c 179 g 213 t ORIGIN 1 accaggtttt gttccgatat ttattatgtt gacaggctag gaatactggg ataaataagt 61 aatattttct cttacagaaa actgtaatga tactattgag tgggattaaa cactgaggat 121 tccacagaaa catcaggatt ttaacagtag ccagagtcct ggtggccaga gggagatctc 181 ccagctgaaa tgctctggac cacatctcaa aatagctaca agacaaaagt gccattaaca 241 tcccacaatg cagatgcctg gccctgcacc tggcttccaa ccctggtctc cacaggctgt 301 ggctgtggtt atctttggct cttcctgccc tgtcactgag tatggagtcc tacacccttt 361 gaaagttgga ctttgtgcct tcattgtgtg acgttgtaac agtttgtagc caaggacaaa 421 gctgctgtgc ccagggttct tcctctgcag tgggtacagg gaaaggtgtc gtccatcctc 481 tgttggcaca aagtggctca gctggtcatc agccagtttc actcccctgg tgccagccag 541 ttcatgtggc cacacaaatg cttttgaggg gcactttcca ccatggcaga tccccagact 601 ctcagaaatc agatctgatg aaactcccgg aaaaatcatg ccaatgttgt gcaagacaaa 661 catctaaata gcacaacacc aggctctgaa acggataccc tatgcacagt cattctggga 721 cagaacagca tattttctag aaagcatacc ctggccattg gacaacctca ataatgaatg 781 ttctcattcc atattccctt ggaagggcgt t //