LOCUS BG067085 750 bp mRNA linear EST 12-MAY-2010 DEFINITION H3050D08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3050D08 3', mRNA sequence. ACCESSION BG067085 VERSION BG067085.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 750) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067085.1. Other_ESTs: H3050D08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3050 row: D column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..750 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3050D08-3" /db_xref="taxon:10090" /clone="H3050D08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 225 a 121 c 162 g 242 t ORIGIN 1 ggttgaattg cctgatgtta agaatgttta gaattcattg tgagaggaag aaatgagttt 61 gttttgttca ttcgttcact ttaacaattt atttaacttt gtgtacattg gtagaagggg 121 atcagatccc ttggaactgg agttacagac agttgtgaac tgccatgtgg gtgctgagaa 181 ctgaaccccg gtcctttgga agaacagaca gtgctcttaa ccactgagcc atctctcaag 241 ccccaagaaa tgactttatc catactggtt aattctattg aaggcttttt ggggttttgt 301 ttggtgtttt ttctaattgt aaaagtgtag tgacaattca gctaccataa aataccaaat 361 tttatgactt tatagactat tctctgatat taaatacttt ttgtgagttg atgtaggaga 421 tgtaaaagta aggagattta aattatacat tagtccctaa ggaaaaatta aaattactat 481 tgaagaaaaa aaaaatgtga tccactttgg ttctcagggt atttaatgac tcatctgtgc 541 gtccactaaa gaatttcttt cctttaaact aacataggag ttgaaatccc ttttacagag 601 caaggcaggt gtctgtgttc aggatctgtt tcccaggcat ggtagtgcag acctgtatcc 661 aggatctggg aagtgcatca aaagaaacca gatgggctga agagatggct cagtgtttac 721 gaacacttcc tgcacttgca gagaacctag //