LOCUS BG067078 649 bp mRNA linear EST 12-MAY-2010 DEFINITION H3050C11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3050C11 3', mRNA sequence. ACCESSION BG067078 VERSION BG067078.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 649) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067078.1. Other_ESTs: H3050C11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3050 row: C column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..649 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3050C11-3" /db_xref="taxon:10090" /clone="H3050C11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 170 a 151 c 186 g 142 t ORIGIN 1 aagaaaatga ctctttgttc acaaatacag agttcagccc tcctgtagtc actataaaac 61 agattccatg ttttcacacc actcatggtc ttccaggtta tagataaatt ttgtcctatg 121 tgtctggtgt gcgggcacag ggtccctccc cagattgtct agggtcagag tagaggcaaa 181 gaactcactg gtgctcagcc cgccctcgtg gtttttgatg tagcgtttat agtttttccg 241 cagcactgcc acgtggtggt gtagaggatg aaggcaaagg acttgagcgc aatggcgatg 301 ctgacgtaca ggtatctgta gaccacattg tcgtagagga cacaggcgcc ttgttccccg 361 cagaaggtgc tccagaacag acaggtggag tcaatgccgg ccccgaagat gagaggtggg 421 gggatgaaac ccaacaaacg aaggagcaga aaaagaactc ccagcgcata agacttgagt 481 tcagggctga ctgtcctgat gaggatgatg acagaagggg tttgggccat ggccccgatc 541 aagctgcaca cacacatcac acagaggaag gtgaggaagg cctcttggca cccaggactg 601 ggacattttc ctggaaccac gctggcattc tcagggggga cagtggtga //