LOCUS BG067038 680 bp mRNA linear EST 12-MAY-2010 DEFINITION H3049H04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3049H04 3', mRNA sequence. ACCESSION BG067038 VERSION BG067038.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 680) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG067038.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3049 row: H column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..680 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3049H04-3" /db_xref="taxon:10090" /clone="H3049H04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 171 a 136 c 173 g 200 t ORIGIN 1 gtcttggcca ttgtagctta aatgtccttt tttaaagaaa atggctgctc ttgtctcttt 61 gggttggata ctttcccaga ctaaagaagt ttgagctgga tattaaaatg tgtgtctata 121 atggtcctta gtagtaattc tttcattctt agatgcctga ggaagtgcac catggagagg 181 aggaggtgga gacctttgcc tttcaggcag aaattgccca gctcatgtcc ctcatcatca 241 acactttcta ttcaaacaag gagattttcc tccgcgagtt gatctctaat gcttcagatg 301 tgagtattct gttgttgaat ttctaaggct tcacggaagt gtgtgtgtgt gtgggagtga 361 ttgagaagaa cagttcagtt gatgttgaag ggggagggac tgtttggaaa aataaaataa 421 tctggctttt tgcgtttact acaggccctg gacaagattc gatatgagag cctgacggac 481 ccttctaagt tggacagtgg gaaagagctg aaaattgaca tcatccccaa ccctcaggag 541 cgcacgctga ctttggtgga cacaggcatt ggcatgacca aggctgacct cattaataac 601 ctgggaacca ttgctaagtc tggcacgaag gcgttcatgg aggctctcca ggtgtgtggc 661 ctttcatcca caccgtcctc //