LOCUS BG066625 694 bp mRNA linear EST 12-MAY-2010 DEFINITION H3044C05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3044C05 3', mRNA sequence. ACCESSION BG066625 VERSION BG066625.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 694) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG066625.1. Other_ESTs: H3044C05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3044 row: C column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..694 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3044C05-3" /db_xref="taxon:10090" /clone="H3044C05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 204 a 175 c 131 g 184 t ORIGIN 1 ccagcaggct agctcagact tacattatgg tctcagagtt ccaggtcgtg agaaagcatc 61 catgcggcat atacccaagc acacacacat aagcaaaata catttaaagg taatgttctg 121 ttgttgttta aagaccaaaa gcaacttagg agaaaaggat gtcttttaac ctatagatta 181 tatatagctc actattaaga aaagccaagg caagaactca aagcagaagg aactcaaagg 241 agcaaaaacc atgaaggaat cctcctcatt ttctacggct cattcagctt gctttcttat 301 ataacccaag atcagctgct tagggatggc gccatccacg gtaggctgag tattcccaca 361 tcgatcattc atcaagaaaa tgcaccacag acacgcccgc agccagttct atggaggcac 421 tttctcagtt gaggtttcca ggtgactcta tagcatgtga caagttgaca aaaactagcc 481 agcacagtgg aacgggttgg ttttggacct ccaatcctcc ttccatttca gccataaagt 541 taaatatcga aataaacatg tgcatacaag ttttagatgt ttgctcaatc gccattcggg 601 taactttgcc cctacccttc ccttcctctc ctgttctctc ccctccttcc cttccttatt 661 gaatggccca ggtttacttg acagccaggt tcgc //