LOCUS BG066596 713 bp mRNA linear EST 12-MAY-2010 DEFINITION H3045G09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3045G09 3', mRNA sequence. ACCESSION BG066596 VERSION BG066596.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 713) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG066596.1. Other_ESTs: H3045G09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3045 row: G column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..713 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3045G09-3" /db_xref="taxon:10090" /clone="H3045G09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 184 a 173 c 182 g 174 t ORIGIN 1 cctgtttgtt tttctttcag aaagatcagt agagatctga attcgtttga ggtggaggga 61 accacacttc tgtgaaggag acttagccca gacactaaag gaggtggaag gtctcaatgg 121 ctggcgcagg atcaggatgg aagcccatca gagacctgat tcactggtgt gctggggacc 181 aaaacatgga gaaggctcag ttttcacagc ccctgtactg gctggttttg cgtgtcaact 241 tgacacaagc tggagttatc acacagaaag gagcctccct tgaggaaatg cctccatgag 301 atccagctgc aaggcatttt ctcaattagt gatcaagggg ggagggccca accctttgtg 361 ggtggtgcca tccctgggct ggtagtcctg ggttctataa gaaagcaagc tgagcaagcc 421 aggggaagca agccagtgag caacatccct ccatggcctc tgcatcagct cctgcttcct 481 gacctgcttg agttccagtc ctgacttcct ttgatgatga acagcaatgt ggaagtgtaa 541 gctgaataaa tcctttcctc tccaacttgc ttcttggtca ggatgttttg tgcaggaata 601 gaaaccctga ctaagacagc ctccaataat caattcaaag aaatcagacc acatccttct 661 gaacttgtcc aatctgtggc ccacagtcac acctgcccca agacagtggt gag //