LOCUS BG066499 695 bp mRNA linear EST 12-MAY-2010 DEFINITION H3043F09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3043F09 3', mRNA sequence. ACCESSION BG066499 VERSION BG066499.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 695) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG066499.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3043 row: F column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..695 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3043F09-3" /db_xref="taxon:10090" /clone="H3043F09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 213 a 161 c 160 g 161 t ORIGIN 1 aagacgacaa gaatatataa tcaccaggcc ctagtgacaa cctcacagac acgtcatgtt 61 caatatgatg cccaaagccg aggcttaggc ttgagtagct aggagatgac cacctttccc 121 aagccacagg gagaggcgta ggcaatgagg gaaagatcat gaatcttatt ttaggggaac 181 taacgttgag tgtttatgtc gagaggggga cctggaaatt acaagcaggt aagcaatagc 241 taaacccaaa caagaagtga agagggccaa aggcagagct ctggggacat caaagcttaa 301 gctacataaa ggaggctcag aagtggcagg agagagatct atccaggtct cacaggcccc 361 taggatgcca ttctatacac acaagacccg gtgtagcttt gctctaactt cttaaagcat 421 catttaaaat catctacttt aatatacagg aaacacataa aacattttaa aagaacgatg 481 tccaagtacc agagttggtg cctgagagga atcagaacag ggctttcttt ggtgcccttg 541 gggatgactc cagcacagcc ctagctctcc aacaaggcaa aatgctgatt ttccttgtcg 601 tggtcctggt ttggctcccg tgctcctcct ccagctttga gaaatcttcc agttccaaga 661 acgactcctt cctttaagtc cttaatcgac tatcc //