LOCUS BG066487 737 bp mRNA linear EST 12-MAY-2010 DEFINITION H3043E09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3043E09 3', mRNA sequence. ACCESSION BG066487 VERSION BG066487.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 737) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG066487.1. Other_ESTs: H3043E09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3043 row: E column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..737 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3043E09-3" /db_xref="taxon:10090" /clone="H3043E09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 215 a 190 c 178 g 154 t ORIGIN 1 gtccataaaa aataaattta tttacatatg ttagttacca tgatagtgca gcattgccag 61 gaccactaag caccatgtac tgggtagaaa ccagtataat agagaccagc cctagcccca 121 gccgcccacc acacacagtc cttggaccag gaagaatagt acatccctga aagaccagga 181 accccacaga aggctatgct gtggcagggt gagacaatta gaggggtgaa gcacatgtcc 241 ccaaataggg gacagtgtgg gtgggaagga gctgagaccc cataaacaag ctgcactcac 301 tgaatggaga cccaacactg attaaacaga ggagggaact caggaaatga accccagtct 361 gcagagattt cgagcaaaac cagcacctgg agttaatgtc tccacctcaa catgtcctgc 421 ccaggaagag tatgccactg tctgtagcaa cactgccctt agtgacaggc ccccgaagag 481 ctctaatgcc ggccttcttt ctagtgctgg gaaacagctc tcatccacgg tcacagaagg 541 acctggctgt gcaggacctt gccatcaacc acaaggcaat caagattagc ttcaaaacca 601 acccgtttct gcactggact cagatagcag gcagggggtt gtgatcagag ctaaagccct 661 aggtttttac ctggtccacg tattcttccc ctgaaactgg gctttctttg gttacagaag 721 tttgcactga tttgggg //