LOCUS BG066461 738 bp mRNA linear EST 12-MAY-2010 DEFINITION H3043C07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3043C07 3', mRNA sequence. ACCESSION BG066461 VERSION BG066461.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 738) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG066461.1. Other_ESTs: H3043C07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3043 row: C column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..738 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3043C07-3" /db_xref="taxon:10090" /clone="H3043C07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 273 a 131 c 129 g 205 t ORIGIN 1 aaaaagaatt atttatttta tgtatatgag tacactgaca ctgtcttcag acacaccaga 61 agagggcatc agatcccatt acaggtagtt gggagtcacc atttggttgc tggaaattga 121 attcaggact tctggaagag tagtcagtgc tgttaaacac tggtccacct ctccatatct 181 tgtcggtcag ctttttaata acacaatcag aaggtgagag agggagtatt tacaaaacac 241 tgagacagga gatgcttaac aatttcaaag tcccacctgt aactggatct ctgccagttc 301 agaaatcagc attattataa tacagagaca acctgtatat ctctgggtca acctggtcta 361 caaagtgagt tctagaacag ccagggcttt ttacacagaa aaatcctgtc ttgaaaagct 421 aaatcaataa aaaataaaat aaacaaataa acaaaaaaac aaataggtca gtcttgaaac 481 catatacaca caaacaataa agactcagca aactgtattt aaatatattt gaacatatac 541 attcatatat gtatacatgg acatatacat acgtacatgt atgtgaatgt attagtcagt 601 actatattgc tatgaggaga cactatgacc ctggcaactc ttacaaaaga aaacatttaa 661 ttggggcttg tttacagttt caaaaaatag gttttctcct tagatggaat aagccaattc 721 aaaccgaatt aagagttg //