LOCUS BG066434 599 bp mRNA linear EST 12-MAY-2010 DEFINITION H3043A01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3043A01 3', mRNA sequence. ACCESSION BG066434 VERSION BG066434.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 599) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG066434.1. Other_ESTs: H3043A01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3043 row: A column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..599 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3043A01-3" /db_xref="taxon:10090" /clone="H3043A01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 165 a 133 c 137 g 164 t ORIGIN 1 aattcaaggt ctgattgtgt agctctgggt agcttggagc ttagatcgcc ctgtctctgc 61 ctctgtgtct tagggatttg tttctgtgaa gagacaccat agcaaggcaa ctcttacaaa 121 agcaaacatt tcagttgggg ctggccatta tcatcgtggc aattttgcag acaggcatgg 181 tgctggagga gccaagagtt ctacatcttg atccaaaggc aaccaagagg agacttttct 241 tcttcattga gcagagcttg aaccattcac aaagtgtcac tccataatta tggccaagca 301 ttcagcacac aaatcagtgg gggccaaacc tatcaaaacc acctcattct acctcctgag 361 ttgtgagatt actgccatgt ccagctagac tatgacttta tgaagtgttc tctttagcta 421 ctgttaggaa cttatgtcgg cctttttatt tttcagcaat ggtgataaaa taaaaccaag 481 ggcctcccag gtgctaggga agtgcgctac cactgaacaa tctccccagg ttatatacca 541 gtttgaagat aaatgtgcca agccaggtag cacttgggaa atggaagcac tggaggatc //