LOCUS BG066128 759 bp mRNA linear EST 12-MAY-2010 DEFINITION H3039C05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3039C05 3', mRNA sequence. ACCESSION BG066128 VERSION BG066128.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 759) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG066128.1. Other_ESTs: H3039C05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3039 row: C column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..759 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3039C05-3" /db_xref="taxon:10090" /clone="H3039C05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 209 a 213 c 143 g 194 t ORIGIN 1 atcaaatata atctaacagg aatcaaactg aaaaaggaaa cttcagttga gaaactgtct 61 ccatcagatt gtgtagtagg caaaagatca ttgagtattt tcttgactga tgatttacat 121 tgcaagtgcc atcctgaaca gctggaataa gaaattagtc tgcacagata gtaattctat 181 tccttcatga cctcttcttc agtgcctgcc tccaagttca tgtttgagtt cctgtcctga 241 ctaccattca taatgtactg taagatataa gatgaaataa actttccttt ccaaacaaaa 301 caaaacaagc aaaccaatca acccctggcg tttctcgagc tggacctggg aacagcacag 361 cccaggagca ggagtgctgc aggaccaagc atgcggggga gagcacatca ctcaccccag 421 ggctgatggg agacgcaggg ccatgtcgcc aatcattcac agcttacacc tctgcacccc 481 acttccctgg ctaccttgac atgtgcttgc tcttagctct tcagtaaaag ccagcttggg 541 tctagaaaag acacttccct cttcactcca ttgtcagtct gcactactgg tcatgtgtgc 601 ttccactacc ccagctcaac agtccttcct ttcccaggag ccttctagta aggccgccct 661 tcaactgcat ctcaactcag ccaaacaggt accagaattc tcaggagccc ctgcttggaa 721 ctcaccattc ccttgcagca ctgtctgccc caattcctt //