LOCUS BG065299 702 bp mRNA linear EST 12-MAY-2010 DEFINITION H3029E05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3029E05 3', mRNA sequence. ACCESSION BG065299 VERSION BG065299.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 702) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG065299.1. Other_ESTs: H3029E05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3029 row: E column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..702 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3029E05-3" /db_xref="taxon:10090" /clone="H3029E05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 167 a 184 c 149 g 202 t ORIGIN 1 agtaggaagt actttaatca tttttcttag aaaaaaaaaa aaaaaattcc cagatactca 61 atgaccgttt acagcatttc aacacaaagt acttggttgg gagtggttag gtttaaatat 121 tgggaatgtg tggcattctg cttcctcaca gacggacaga gggcatacgc atcacaaatg 181 ggagacttct agctgcttgg ccactatcga aacagtagcg tttttttctt ttcagtttgt 241 ttcccttcct gctgtctccc tatgccacag aaatgccgcc atctaaagcc ccatggtggc 301 tggcttagcc tctcttccct tggggagaaa cagtaaaggg aaggtcactc ctgagtctcc 361 atgctttctt cttcttctcc ttgaggtggt tcttctgtgt tctcctcctc ttcctccccc 421 tccttcttct caggtggctt ctcataagcc ttttctgagg gtgtcacaat cactccatcc 481 caggtagata tttcagaagc aagatagctg gcatccccct cctggccaag gatcttccta 541 aagcctccat gggagagaat tcgaaccaga gtctgagctg tgtagcagac catatcctgt 601 tgttctaggg ccataactgt gtgtaccctg aagttgccac tctcacacgg gtcagtgatg 661 cccactgacc caggcaagaa cagtcctgca gccagaatct gc //