LOCUS BG065109 569 bp mRNA linear EST 12-MAY-2010 DEFINITION H3027D12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3027D12 3', mRNA sequence. ACCESSION BG065109 VERSION BG065109.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 569) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG065109.1. Other_ESTs: H3027D12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3027 row: D column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..569 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3027D12-3" /db_xref="taxon:10090" /clone="H3027D12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 199 a 108 c 88 g 174 t ORIGIN 1 gcattcacaa acctaataca gtttaattgt tttcaatcaa aggcttccac ttacatttgt 61 ttggttaatg ataaataaag acagtttaaa tgcttcagta agtcaagtaa ctcatcaaac 121 ctgggtttga attactgtta ccattcagca actccatcca aataacatcg atactgcact 181 ctcagatagg aaagaaaaaa aggtacagct gcggcaaatg gtgaagtctg cgttctgagc 241 attttttaaa agaaacagcc actctgcatc ctttcctctg ccactctgct ttgataatgt 301 gaatctgtca cattttactt caacagataa agcactctgc tgagaatata aaaagttata 361 aaaatgtaat cataaaagac taaatattgg taggcatgtc aactttcttt taataaaaac 421 aaaaatagtc attgttatct atttaaataa gtatcttgtt atagagtgtt ccagttattg 481 aaaaggggcc cttaaaaaac ccaactgcct acgtgtaaac cctacccctc ttgcctctta 541 agacagaatt gagggaagag tcatttaat //