LOCUS BG064913 682 bp mRNA linear EST 12-MAY-2010 DEFINITION H3025C04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3025C04 3', mRNA sequence. ACCESSION BG064913 VERSION BG064913.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 682) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064913.1. Other_ESTs: H3025C04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3025 row: C column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..682 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3025C04-3" /db_xref="taxon:10090" /clone="H3025C04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 149 a 175 c 163 g 195 t ORIGIN 1 gcaaattagc tacaatttat tccaagcaca gcaccgccag aagacgcaca cacactattt 61 ggtgtcggct ctcctcgcac tctgttaagg cagtggcttc cacaggtcag ttcggagaga 121 agaagcgaag ttcatggcag tttgctttgc aactccatcg tttttctctg ggaacatctc 181 acttcattcc ctgaaattag tgcttttggt tctgagctcc ggaggctggg ctggagcctg 241 ggggctcttc ctggcacggg atggtgcggc tggggctctc ggcaggtccc ggttccacac 301 gggaacaata gcactcctct tctgtctcag gcgtttactc aaaagtcatc aagtttgtag 361 gaacctgttg cttgttactc tggcaggccg cgctcaagtg tttaaaccac agcattgcat 421 tcatcctgct gccagcttga aacttgtatg aatttccttt ctcggagtca gtcagcagaa 481 agaggtctgg atgctctggg tcgtcagcca tcatcaccat ccagcccacc acagacacat 541 tcttatttga cgttgatttg aaatgctttc tttctgtagc cttcagagat ttggcggcat 601 agtaaaaaag ctgtgttcca acaaggctgc ccaatacttt gtccaagatg ctactgtggg 661 tttcttgcct tcttttagca ag //