LOCUS BG064725 791 bp mRNA linear EST 12-MAY-2010 DEFINITION H3023B08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3023B08 3', mRNA sequence. ACCESSION BG064725 VERSION BG064725.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 791) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064725.1. Other_ESTs: H3023B08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3023 row: B column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..791 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3023B08-3" /db_xref="taxon:10090" /clone="H3023B08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 281 a 151 c 135 g 224 t ORIGIN 1 gagagctaaa actgtgtcat atttttattt taggctataa aaacaaaatt aggcaaacaa 61 acaacagaaa aactcaaaat aggttcatat gatgtatatt catcttttcc aggaaagcag 121 aaggtaggcc ctaccacaaa gaaaagattt aattaatgga ggttaatttt caaaatacat 181 taaatactat caacttcaag agaacctagg gtttgttcac cttgctataa acgagttgac 241 ttttgtttat atcatcgaaa acataaaaat gctttcataa tctcagttat taagtttgat 301 cttactggaa attcttaacg acaattttcc tccctcaaat gatgtcaccg tgccctgtgc 361 atccctctaa caacatgagg gaaatgatgt caccgtgccc tgtgcatccc tctaacaaga 421 tgagggaaaa cacagctaat gcaggcggac ttcaacctgt tctattagct gaaaacaact 481 ttggttcttt aggaaagaaa cagctactcc aagtatgttc aacagttggt tttcataatt 541 gtattccaat agctaaatga tgaaaatact ccagaagaac caaactgcag caataaatga 601 acatgcatta gagaggatgt atgcattaac gtatctgaca gagctagagc tagggtgcta 661 ggtagaacaa actcgtcttt caaatatcaa tctcctttcc cttaaaaact tactgattct 721 accaagaaaa tacaaaacca taaggctgta agtaaatgag tcatgtttag gctattacag 781 ggcggccgtc c //