LOCUS BG064694 710 bp mRNA linear EST 12-MAY-2010 DEFINITION H3022H09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3022H09 3', mRNA sequence. ACCESSION BG064694 VERSION BG064694.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 710) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064694.1. Other_ESTs: H3022H09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3022 row: H column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..710 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3022H09-3" /db_xref="taxon:10090" /clone="H3022H09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 225 a 169 c 149 g 167 t ORIGIN 1 atctcaaaat tactattgct gaaataatca aattctacat taaaatatta ccaaacacca 61 ttacatgcca taaaagcata aatagaaacc atggcagatc aatagcagca tcacaaagca 121 tctttacagt tctgactgcg gccagagagc tcgcagccta ggatatactg tgaggtgcta 181 ggtctcacac ttgctttctg actccagagt ctacaactaa ggaaggaagg aaggcaggca 241 gtgtgagcac agctcccttt ctgcatagct ttaaactgct cagcacattt gaggaatgga 301 accagaatgg ctttgtcaga atggtccact ggtccttttg ccaaagtgtt aaggaaaaca 361 atcaacaata acttgaactg tgtttagaca gaaaaggaaa gtaaggctgc gcttcacaca 421 caaacttgac acttaaactg ctgagagttc actaaaatgg agccttctgg taggatctgg 481 atctgtgtgg ccccggcctc tgcttcaagg gtgtgaacct cctccatcag agcccagccg 541 gcctatccca agagctgtgc ttcaccggag tttgcacagg gcaggaccag ggacacttac 601 cggaacacaa agacatccca gaagtcttaa ggcccaagcg gggtgctcat agaaaatata 661 cttcacttga acaaatacct tccaaagagt caacttaaat tctgatcctt //