LOCUS BG064509 608 bp mRNA linear EST 12-MAY-2010 DEFINITION H3020E11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3020E11 3', mRNA sequence. ACCESSION BG064509 VERSION BG064509.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 608) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064509.1. Other_ESTs: H3020E11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3020 row: E column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..608 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3020E11-3" /db_xref="taxon:10090" /clone="H3020E11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 142 a 172 c 148 g 146 t ORIGIN 1 aaagaatggc cttgaaattc agtgcagaga tacggtcaca tggatacaat gggacacagc 61 ctctctaatc gtcagaatct ctttgctgat gaaccgggta cagatgacca tgcaggcaat 121 acccaggagc tgcagcttgt atctggggac cagcctcctt cgcaggtacc ggtctacaca 181 ctccacagtc aggtgaagac acaggcttgt aaagtccttc attgtggcaa cttccaccaa 241 ccagtcgatt agaatgtacc tcatggtgtc gctgagcccc ttctgcacag agaatatctg 301 ctgcttgttg acagcctggg aggcctggaa gagctggcag accgactcac tgcaggcctt 361 cccttccagt ccaagttggc ttccacctgc acaggctttg gccaaagcca gctgtgcttc 421 ccagcagcct ttcgcagcgt agtccctgag tttccggaag ctgtggaggc atcgtccggg 481 gtcggacata tccacctttc tgtcgctttc ccaaaggagg tatgagctga ttaagcatcc 541 ctgacgagaa gactcttcca aaaggctacg cgcctgcttc cttttctctt cgtcctcaaa 601 aagattta //