LOCUS BG064354 615 bp mRNA linear EST 12-MAY-2010 DEFINITION H3018F02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3018F02 3', mRNA sequence. ACCESSION BG064354 VERSION BG064354.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 615) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064354.1. Other_ESTs: H3018F02-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3018 row: F column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..615 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3018F02-3" /db_xref="taxon:10090" /clone="H3018F02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 183 a 129 c 108 g 195 t ORIGIN 1 ctggttcaaa cctttctggc tttaatattt tatgggtaaa agggaaacaa agacaataac 61 tgcatgcttt cagattgtga attcacaaac ataaacaatg tctcaggtca tttatgtatc 121 aggtaagaac atacctgttg gctagattta catttctcca gcagatggac tgtattgtcc 181 aaaggacctc ccgagctcca gtactttgtg ctaaacgtgt gaactgaggt aactagtaca 241 cttagatcag tgggctccta aagttaagag cagaagtctt ccctttgatc tgcagtgttc 301 ggaagcttag gtttccttca gtaggagatg atcaagcaac aatctttgcc catactgaat 361 tcatttgctt ggtttctcaa gtaaagtttt caatatctta caatcaatga attatttcca 421 aaactcatta ttaatcatcc tatccctttc aatttcccac tacccacttc tatcttaagt 481 gaacaaacag agagtccttt ccttaatttt cttaggtaag gcaaaaataa tcagcatcct 541 cacatttgat attgcacatt ttggaagacc cggacttaga agctcagtga tgctcgtgct 601 ccatctacag agggt //