LOCUS BG064336 622 bp mRNA linear EST 12-MAY-2010 DEFINITION H3018D07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3018D07 3', mRNA sequence. ACCESSION BG064336 VERSION BG064336.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 622) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064336.1. Other_ESTs: H3018D07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3018 row: D column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..622 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3018D07-3" /db_xref="taxon:10090" /clone="H3018D07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 220 a 117 c 107 g 178 t ORIGIN 1 atcaggccaa aaagatttat tcaactgtac attaaataat aaaaaagaca gaagcaccaa 61 ctattttaac atatttaaat ttccactcag tgaggtagaa gtttttcccc cccaggagat 121 taagacctga tgtggaaatg tcaccatata tattatatag agatgctaat tacttgctga 181 tcaatttatt ttttaaaaaa catctgtacg taagtgaaaa agttgagtaa taacctaaaa 241 gaggcaaacc ggggtgaaat aggatgtacc ttgtatgcta acatcaattc aggaaccaaa 301 acgcctcaga aatatatcag aaatacattt atatcaaatc ctcatctaat attaaatata 361 aaacaaccag gaaatcccaa aattcataga gtaatagtcc tctgatctcc ctggcacaga 421 gtggcttcaa gcaatgagat gggccagtct gtctgactgt ttaaatgtaa cttgtatgat 481 ttgggaatca gacccgaagt tggtagtttc ttttgtgaac tctcagcctt gagctataat 541 ggaaccttag gcattgcagt acagacccca aggctaaccc acaacttaaa gtggaaaatc 601 ttatggtttt tcccccttgg tc //