LOCUS BG064328 687 bp mRNA linear EST 12-MAY-2010 DEFINITION H3018C10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3018C10 3', mRNA sequence. ACCESSION BG064328 VERSION BG064328.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 687) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064328.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3018 row: C column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..687 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3018C10-3" /db_xref="taxon:10090" /clone="H3018C10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 167 a 122 c 141 g 257 t ORIGIN 1 gttttgtttt gtttttgtaa ttttttgttt acactgattc atatgctaca aatgtgtctg 61 gcttccttta accccagtat atattttgtt gtgtgttttt tctcccctct aagaaaccag 121 atttaagatt aggcaacaac ttgagaagaa tacattgctt agaatgtgtg gaaagaacag 181 ttgttttaag tccaaggcag gctttgacct tctgcctttg gttactacct cccatgtgtg 241 tccagctgtg tcctaatgat tttgaagctt tgttcagtga ctgtttccaa aataatttgt 301 tattttcagg atttgatagt ttggttttca gattggtgac agaagtttgc ctgttgtgtc 361 tgtatgtagt catgtgtgaa aaatgtaact gtgccttgtt tgtattgcta taggcgagga 421 gaagaccttt tcatgtgtat ggacatacag ctggttgaag cattgtgcgg cttccaaaag 481 ccaatatcta ctcttgacaa ccgaaccata gtcatcacct ctcatccagg tatgatgacg 541 agatgaacct gtttccctgc tttgcatttt ccttgtcttc tgataactat gaagtactac 601 ataggtattg agggaaatgt cttgctttcc ttccatggtt atatatcctt agagctgaga 661 tgaaatttac tggtcacctc ttggaaa //