LOCUS BG064201 583 bp mRNA linear EST 26-JAN-2001
DEFINITION H3016G05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3016G05 3', mRNA sequence.
ACCESSION BG064201
VERSION BG064201.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 583)
AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A.,
Tanaka,T.S., Carter,M.G. and Ko,M.S.H.
TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set
JOURNAL Unpublished
COMMENT Other_ESTs: H3016G05-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3016 row: G column: 05
Seq primer: -21M13 Forward
POLYA=No.
FEATURES Location/Qualifiers
source 1..583
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3016G05-3"
/db_xref="taxon:10090"
/clone="H3016G05"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 114 a 104 c 203 g 162 t
ORIGIN
1 gtttggggtt tgtttactat ttaatttttt ttattggttt tttacacatg gtgaaaaaac
61 tactgtgcag gcaaggaata atcatactgg tgtggcgccc acattataag tgatgggact
121 ataaatttaa aacatttttc tggtttaaaa aatggggggg ggtcggcaat gcgactgtgc
181 gggtctctag gagggccggt ctctgcggtc ctgacggtgc tcggctttat ccattttccc
241 aggtcctcca cggccatagg tactctggtg gccataggtg gtcggctggc cataggtggt
301 ctggtgagag gaactggtct gatcggaact aggcggctgg gaagaggagt aggtggtagg
361 aggataagat ggaggtgcgg tgactggctg gattgggtag ctcccaggta cctggggata
421 ggtggaggta ctctggccat atcctaggct gggttggtta taaccccctg tgctagattg
481 agggtgacta ggctcagcag gcttggtacc atcctggggt ctggtaggtg cggtggctgt
541 tggctgctgg ccataggggg ggtaggcagg ctgggtgcca tat
//