LOCUS BG063836 589 bp mRNA linear EST 12-MAY-2010
DEFINITION H3011C11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3011C11 3', mRNA sequence.
ACCESSION BG063836
VERSION BG063836.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 589)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG063836.1.
Other_ESTs: H3011C11-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3011 row: C column: 11
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..589
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3011C11-3"
/db_xref="taxon:10090"
/clone="H3011C11"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 193 a 134 c 107 g 155 t
ORIGIN
1 atataatctg tgggttttta tttatatata tatatagtat atagaaaaag tataaaagtc
61 ataccaaaaa gcccacaaac cagtgcccaa aatagctact tattaacatt ttttgccact
121 tccacagcag agccaatgag tttaaatgta gctcctaact ttggattcga gagtccatca
181 gaatcagtgg taagcctaaa gctcacaaga acactcagga cgaggagaag tgaaaaattc
241 aacagtatag tcggggccaa ctttgaattt gtggtcctcc tgcctctgcc tccagagtct
301 gagactacac aggtgacagc acaatcagcc taggctgcaa agatctcttg gtcttttcag
361 aaagagagtt attgccaaac tatatgaaaa agggaatcct acctaaagat agtaatcaga
421 tacaacattc aggcccctca gctgtctacc aacaatcaat atggctgcca tcaagcaatc
481 tctattgtag gatctgagtt cccatttcct ctggcaatcc tagccacaca cttcacctac
541 agtgggtaga attcctggtg ctatgaaagg cctacattac ttcagaacc
//