LOCUS BG063781 656 bp mRNA linear EST 12-MAY-2010 DEFINITION H3012F12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3012F12 3', mRNA sequence. ACCESSION BG063781 VERSION BG063781.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 656) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG063781.1. Other_ESTs: H3012F12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3012 row: F column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..656 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3012F12-3" /db_xref="taxon:10090" /clone="H3012F12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 238 a 128 c 97 g 193 t ORIGIN 1 gagaatttaa ttatttaata caaccactaa tctaatatgt caccaataaa gtctaagcaa 61 tcacatcaca aaacaagagt tatattcagc gaacatgcat taataatcta tacaacttaa 121 cattacccca gaaaaggaat tggatataaa agttcgtata atttttggtg gttttcaaat 181 cttatggcac agattaccaa aaaaactgta aaaacagatt tcaaatattt tcagtaaaat 241 ggtaaaaaat tgaataagcc tttaagtttt catagtcggc tcaagattaa agcatcaagc 301 tggccccaat ctgtctaaac tgacagataa atagttaaaa tgactgacac tttagttaca 361 atggtaccgg aagtctcttc cttctatcaa aacccctttg ggttaaattt ttcaatgcaa 421 acatgtcttt gtaaatactg tgagaattta aacttagaga catatgtagc atcgggacag 481 aaatgaaatc taagacatta agtctgactg gtcagcagaa agtcttgtgg ttcccagact 541 accaacactt tctcaataca aaactaaggc ttctgaatgg ctgcccaacc tgctgacatc 601 cttctacaga gctgtcccat tctatgtcaa tgcaatgttc acactccatt aacctg //