LOCUS BG063742 681 bp mRNA linear EST 12-MAY-2010 DEFINITION H3012C04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3012C04 3', mRNA sequence. ACCESSION BG063742 VERSION BG063742.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 681) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG063742.1. Other_ESTs: H3012C04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3012 row: C column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..681 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3012C04-3" /db_xref="taxon:10090" /clone="H3012C04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 190 a 171 c 153 g 167 t ORIGIN 1 gaaaatacaa aaaaacattt tattttaaca tgaaaatatc acaaaaatta gtaagcctga 61 gatgtagggt tttggtgaaa aacaagaggc ttgtagtgtt ttggctgctg ataacgatgc 121 atgtatcgag agctgggtga gcagcaggag aatgcactta tttcttctgc acgtcagtgt 181 cttcagcaca gtaagccaca tgcacccttt ccttccttcc tagaccgagg ccagttggct 241 atacttagtt ccagcggaag tggatctgac gtgggcgatc agcaccttcc ttcaccaatg 301 gcttatggaa ctcgcgtcct gcacgagagt ggatatttgc ccaacaaaac tcacagtaat 361 actgcaggca ggtgacattg gcacagaaaa agggggcaaa cttcccacca cagcgtgcac 421 cctggcactc gtcacacatc tggtcatcta gcacatatgg cttcacctcc acacgtttat 481 caatgtcacc gtgctgaagc tgaacaaatc gagcactgat ggcagcaatg tagctctgct 541 gattggagaa agcgactcgc ccagcacctt ttgggtattt gagttctgga tctgtatcaa 601 ttcctgcgta acacacacca ccatacagcc ggtccatgat catagcaagt tccacagccc 661 ttagtggcct aggaacacct c //