LOCUS BG063728 685 bp mRNA linear EST 12-MAY-2010 DEFINITION H3012A10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3012A10 3', mRNA sequence. ACCESSION BG063728 VERSION BG063728.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 685) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG063728.1. Other_ESTs: H3012A10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3012 row: A column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..685 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3012A10-3" /db_xref="taxon:10090" /clone="H3012A10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 256 a 129 c 125 g 175 t ORIGIN 1 gctttgaaat ttagaaacaa gttttattta agatctgaaa tacaattcct aaaatatcaa 61 cttttcagaa aactgtggct acacaataat gcattgcctc tatcatgtta gaacgtgcat 121 tagactcaaa tacaaaaacc aggaaacaaa tcaccatcct tcaacaattt gagcaaagat 181 agaatgaatg cctaaggaac aacaaagatg gacttgcaga ggatgggctg tttacagacg 241 tcaagcacca taaaaaaaaa aaaagcacaa atgcatgggt ttccaggtat atacattaag 301 ttgaaccttt ggcactagga accagggcat ctcatcacgt agcattaaca catattagaa 361 aactgtgtag tgtcaaaggg atagaaccac cagcattcaa gcaatgttgt caactaggca 421 ataaaatggt ctactgaatt tcttctttgt ctaattactg catacactgg tagcaacttt 481 gaaatgagga aaggagctgg gcactccttt tattttctgt ctacaacaga acaggaaaac 541 aaactgaaac ataagccctg ttttacactg acagttttaa agaacatcaa ttataccatg 601 aaaggactaa acagaagtgt ttacagatac cagacaatag tgagcggtca gtagaccttc 661 acagggcttt gcgatgatag tcagc //