LOCUS BG063650 838 bp mRNA linear EST 12-MAY-2010
DEFINITION H3009G12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3009G12 3', mRNA sequence.
ACCESSION BG063650
VERSION BG063650.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 838)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG063650.1.
Other_ESTs: H3009G12-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3009 row: G column: 12
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..838
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3009G12-3"
/db_xref="taxon:10090"
/clone="H3009G12"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 270 a 176 c 197 g 195 t
ORIGIN
1 gatcttaaat tactttattg ttcagattaa gcatcctcat tgacaatcca gaagcagtct
61 gagctgacag ttaagcaatt ccttaatttt cagtgtcaaa gtagaaaaca catgttcaca
121 agctacaggt gaattactgt cccttcaaaa catccaccaa gtaactacca agccacttac
181 cgaatcatga agaagacagt ttttcaaaaa gccaataaaa ctcagaatta ggaatccagc
241 tatcaagcta ctattatcac tcgagacact gctgtttacg aggggagggg aagggaggga
301 aggaagccca gttgctgtag gtgactagag aggacccgag ggttcggaag gtcagggtag
361 agccatgatg ctcttcacag gtttagagag cattcatgag gaatacactg ggctttttcc
421 tactctagtg aggaaataaa gacacacact gctgggatca acattaaaac tgtccttgcc
481 cacaagaggt gggaggcaaa gggagaaagt tgagaacaca atggggcaga cacagctctg
541 actctgtatc tggaggaatt ctgagccaga atcctaaatt ctacatttgg ctctaaaaca
601 gtggattcaa tacactattc ataaatatca agtgacccac aaggattgtg gcactaaaaa
661 tacttttaat gtactataga cttctattct ggcaagcact agaacagaac gacactggga
721 caactggtca gttacagagc acaggctcct ccacagcacg gatgggagtg agcagtgtac
781 agagaatgga tcaggctccc aggacagtgt ggctggggct gtgactgtcc ccagctga
//