LOCUS BG063566 621 bp mRNA linear EST 12-MAY-2010 DEFINITION H3008G12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3008G12 3', mRNA sequence. ACCESSION BG063566 VERSION BG063566.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 621) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG063566.1. Other_ESTs: H3008G12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3008 row: G column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..621 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3008G12-3" /db_xref="taxon:10090" /clone="H3008G12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 178 a 159 c 141 g 143 t ORIGIN 1 aatgtagcta aaagcagttt ttattgtcca gctaggtcag gcccagggtg tacatctgca 61 ttttcagccc ttgggaggct gaggcaggag atttaaaggt gaagatcagt ctgggctaca 121 gcaccaagac cctgactcag aaagggtggg gggtggggtg gttaaggaag ttacactcca 181 cccccacccc cacccccatt cagtgtctgg aaacagatta cagataaacc taccaccatg 241 gaggggggag atggagatgt acagagggaa agctgtggac catttgctca cagttgtcac 301 caagcgtgac cgctctttcc tgtccaccac tcagtcccca caagtcacgc ttctcacttc 361 cccacgccca gccagacccc gtggccggct tagggcagcc cagtaagcac aaaggagaac 421 acagcccagc acgaacttac attaaatagc atgatttaat ttacttgctc ctcaatcctc 481 agtcctctta agttaaaaaa gaaagttata attaactatt aacgttaatg aatttcaacc 541 ttccagaaac aagaatccaa aaggaaatgt ccaacaggtg acatgagcca ggtattctat 601 ggccttcgct gtttcagttt t //