LOCUS BG063515 663 bp mRNA linear EST 12-MAY-2010
DEFINITION H3008B06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3008B06 3', mRNA sequence.
ACCESSION BG063515
VERSION BG063515.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 663)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG063515.1.
Other_ESTs: H3008B06-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3008 row: B column: 06
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..663
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3008B06-3"
/db_xref="taxon:10090"
/clone="H3008B06"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 165 a 158 c 155 g 185 t
ORIGIN
1 gggtaccaaa attctttatt tgaagaaatg gtacaaatta aagaacttaa gcagatgttt
61 tggtgcaact tatagaaaag atgaaggcag cctgacatgc atgcactgcc tcagtgacca
121 gtaaagtcac gtggctttgg ggaagtcagc ttagctctca tcaccgtgtc ccagggtgtg
181 cttgtcaaag agatattctg ccatgccagc ttcaggggca cccatcttgc gtaagttggt
241 cacgtggtca cccagttctt taatggattt cacctgttca ctcagataat acgtctcaat
301 gaagtcacat aagtggggat cattcttgtc agtagccagt ttgtgcagtt ccagtagtga
361 ctgattcaca ctcttttcca agtgcagtgc acactccatt gcattcagcc cgctctccca
421 gtcatcacgg tctggtttct ttatatcctg caggaagatt cggccacctc gctggttctg
481 cagcttcatc agtttctcgg catgctccct ctcctcatga gattggtgga gaaagtattt
541 ggcaaagttc ttcagagcca catcatctcg gtcaaaataa caagacatag acagatagac
601 gtaggaggca tacaactcca ggttgatctg gcggttgatg gcagcctccg cgtcctggtg
661 gta
//