LOCUS BG063477 608 bp mRNA linear EST 12-MAY-2010 DEFINITION H3007F11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3007F11 3', mRNA sequence. ACCESSION BG063477 VERSION BG063477.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 608) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG063477.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3007 row: F column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..608 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3007F11-3" /db_xref="taxon:10090" /clone="H3007F11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 138 a 167 c 201 g 102 t ORIGIN 1 ccgagcccat caggtttatt gttgcgggtg tgcagtaggc gacatgagca ccttggctag 61 gaaggagggc gcgggcctgg agggcgggag ccctggtcaa gcgagatgag tgtgggagct 121 ggaggccagg ccgcagctca ccgtacaagg tggaaggtga gccagtacat gagtaccggc 181 tgcgcagctg ccactgccat agtcaggtac atgcgcagct ggttccgcgc cccacgcact 241 ggcactcctt cggccgctgc ctgggccagg atcttgagcc gcagtgtccg gatcatgaat 301 acaaagatgg acacacagca ccaggcaagc accaggtagt agccgatctt tccaaagagc 361 agacccgtga ggacgccgcc aatcatcccc acatatttgt agcccaagaa ggccaccagg 421 tcaatggtgg tgaggtcggt gttgacagtg accaggtaga gactgagcag gattgctacg 481 acttccagag tcagccaggc cagagctgag ctcgcctgca gtcccaggag gtctggggag 541 aacccgtcct gggtccccag tgcaaggccg gccaccaaga tgtaggtgat gaaagccatg 601 gctggaat //