LOCUS BG063414 673 bp mRNA linear EST 12-MAY-2010 DEFINITION H3007A05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3007A05 3', mRNA sequence. ACCESSION BG063414 VERSION BG063414.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 673) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG063414.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3007 row: A column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..673 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3007A05-3" /db_xref="taxon:10090" /clone="H3007A05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 183 a 180 c 138 g 172 t ORIGIN 1 gtttttagac aagagtctcc gtgtagccct ggcctcagat tcagaatcta cttgcttctt 61 cctcctgagt gctggaatta agggttcaca taccgtaggt atcaggtcac actaggcctg 121 gaatattctt ccttctcacc atacaaccga agggagtcac tcaccacata cactcgtgtt 181 ctgaaacttg gctgaaagag cagttgacca cctggtttcc agtctcctct ttcctctgtt 241 taaaacactc agcagctgtc tacccagtga actttctaga agttgcacct agtgttgctc 301 caagagtacg agacaggctt agcacctacc tgggggcact gtgcagctca gtatgaacag 361 tatagtatgg cagacaccca caagagtatt tgaaatttat acacgaggcc tagactgcat 421 cccaagcatg gcaaagagag catgtgaaca cctctggttc catcagtagt ccagagtcag 481 cacctcgcac tggatacaca ggcattagct gcactcttgg gctaaagcta actaacctgt 541 cccaccaggg ctttaaactt caagatctct gactaatctg tgcattagca ttagagaatc 601 acagacagca aatgggactc ctaggccaaa tggtccagtc ccaaccttca actttttctt 661 aacacaagga ctc //