LOCUS BG063412 611 bp mRNA linear EST 26-JAN-2001
DEFINITION H3007A01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3007A01 3', mRNA sequence.
ACCESSION BG063412
VERSION BG063412.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 611)
AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A.,
Tanaka,T.S., Carter,M.G. and Ko,M.S.H.
TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set
JOURNAL Unpublished
COMMENT Other_ESTs: H3007A01-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3007 row: A column: 01
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..611
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3007A01-3"
/db_xref="taxon:10090"
/clone="H3007A01"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 220 a 103 c 90 g 198 t
ORIGIN
1 ctttttgaac taatggtgcc caaataacca aaaacacaca gataaaacat cctatacttt
61 atctcatttt tttaacacaa aactaaaact taattatttt ttgagctaca atttttgata
121 ggagtactgt tttatataaa aagaaactga atttgaacag gtagagttat acaaagtggt
181 tccacaaaat ggttcaaaga gaattttcta attgcagaat gcttctgttt agcgtgtggt
241 ggtgtcccta gcatgtgcag tacatatcgc tcttgtagtc ttacaagtct cactagtgaa
301 aggcaactca ctcatacacc ttagcaagaa cacacagact gttttgaagt atgtaactaa
361 tcttcataga gatgcataca agttttggtt caactcttac aaattaaaag attcactggg
421 agaatttttg tacaataaag acttcacaca acgtacaata taaaatgtaa attaattcac
481 taaaaaactg aaatgcatag actctgcata ggtgaaccgg tagctctttt aaatgtcttt
541 cttttctatg gtaaatatat atttcattta cttaatggaa tcacagcaaa atacaactat
601 agtttcaaag c
//