LOCUS BC085196 1681 bp mRNA linear HUM 08-NOV-2004 DEFINITION Homo sapiens mitogen-activated protein kinase 13, mRNA (cDNA clone MGC:99536 IMAGE:6107307), complete cds. ACCESSION BC085196 VERSION BC085196.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1681) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1681) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (29-OCT-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 59 Row: h Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 20986527. FEATURES Location/Qualifiers source 1..1681 /db_xref="H-InvDB:HIT000266107" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:99536 IMAGE:6107307" /tissue_type="Pancreas, adenocarcinoma" /clone_lib="NIH_MGC_39" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1681 /gene="MAPK13" /gene_synonym="p38delta" /gene_synonym="PRKM13" /gene_synonym="SAPK4" /db_xref="GeneID:5603" /db_xref="MIM:602899" CDS 70..843 /gene="MAPK13" /gene_synonym="p38delta" /gene_synonym="PRKM13" /gene_synonym="SAPK4" /codon_start=1 /product="MAPK13 protein" /protein_id="AAH85196.1" /db_xref="GeneID:5603" /db_xref="MIM:602899" /translation="MSLIRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAID KRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD FYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE DCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTGQILHPVPATDPQEG FHSAVPTGQPPGCGPAGEDAGARRGQAPDGRAGPHPSLL" BASE COUNT 383 a 466 c 476 g 356 t ORIGIN 1 gggcgctggg agcccgttgg gccgcgaacg cagccgccac gccggggccg ccgagatcgg 61 gtgcccggga tgagcctcat ccggaaaaag ggcttctaca agcaggacgt caacaagaca 121 gcctgggagc tgcccaagac ctacgtgtcc ccgacgcacg tcggcagcgg ggcctatggc 181 tccgtgtgct cggccatcga caagcggtca ggggagaagg tggccatcaa gaagctgagc 241 cgaccctttc agtccgagat cttcgccaag cgcgcctacc gggagctgct gctgctgaag 301 cacatgcagc atgagaacgt cattgggctc ctggatgtct tcaccccagc ctcctccctg 361 cgcaacttct atgacttcta cctggtgatg cccttcatgc agacggatct gcagaagatc 421 atggggatgg agttcagtga ggagaagatc cagtacctgg tgtatcagat gctcaaaggc 481 cttaagtaca tccactctgc tggggtcgtg cacagggacc tgaagccagg caacctggct 541 gtgaatgagg actgtgaact gaagattctg gattttgggc tggcgcgaca tgcagacgcc 601 gagatgactg gctacgtggt gacccgctgg taccgagccc ccgaggtgat cctcagctgg 661 atgcactaca accagacagg ccaaatccta catccagtcc ctgccacaga cccccaggaa 721 ggatttcact cagctgttcc cacgggccag cccccaggct gcggacctgc tggagaagat 781 gctggagcta gacgtggaca agcgcctgac ggccgcgcag gccctcaccc atcccttctt 841 tgaacccttc cgggaccctg aggaagagac ggaggcccag cagccgtttg atgattcctt 901 agaacacgag aaactcacag tggatgaatg gaagcagcac atctacaagg agattgtgaa 961 cttcagcccc attgcccgga aggactcacg gcgccggagt ggcatgaagc tgtagggact 1021 catcttgcat ggcaccgccg gccagacact gcccaaggac cagtatttgt cactaccaaa 1081 ctcagccctt cttggaatac agcctttcaa gcagaggaca gaagggtcct tctccttatg 1141 tgggaaatgg gcctagtaga tgcagaattc aaagatgtcg gttgggagaa actagctctg 1201 atcctaacag gccacgttaa actgcccatc tggagaatcg cctgcaggtg gggccctttc 1261 cttcccgcca gagtggggct gagtgggcgc tgagccaggc cgggggccta tggcagtgat 1321 gctgtgttgg tttcctaggg atgctctaac gaattaccac aaacctggtg gattgaaaca 1381 gcagaacttg attcccttac agttctggag gctggaaatc tgggatggag gtgttggcag 1441 ggctgtggtc cctttgaagg ctctggggaa gaatccttcc ttggctcttt ttagcttgtg 1501 gcggcagtgg gcagtccgtg gcattcccca gcttattgct gcatcactcc agtctctgtc 1561 tcttctgttc tctcctcttt taacaacagt cattggattt agggcccacc ctaatcctgt 1621 gtgatcttat cttgatcctt attaattaaa cctgcaaata ctctaaaaaa aaaaaaaaaa 1681 a //