LOCUS BC085011 1340 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens aspartate beta-hydroxylase domain containing 1, mRNA
(cDNA clone IMAGE:6378955), partial cds.
ACCESSION BC085011
VERSION BC085011.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1340)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1340)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-OCT-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: l Column: 17.
FEATURES Location/Qualifiers
source 1..1340
/db_xref="H-InvDB:HIT000266098"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6378955"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1340
/gene="ASPHD1"
/db_xref="GeneID:253982"
/db_xref="HGNC:HGNC:27380"
CDS <1..1167
/gene="ASPHD1"
/codon_start=1
/product="ASPHD1 protein"
/protein_id="AAH85011.1"
/db_xref="GeneID:253982"
/db_xref="HGNC:HGNC:27380"
/translation="EGRGSFSVERGPRKERETAQSGMWKGNSPAGSQGAAMEGTGGEL
GGQGNWGPEDAPGLLARASLIMLPWPLPLASSALTLLFGALTSLFLWYCYRLGSQDMQ
ALGAGSRAGGVRGGPVGCSEAGGPSPGGPGDPGEGPRTEGLVSRRLRAYARRYSWAGM
GRVRRAAQGGPGPGRGPGVLGIQRPGLLFLPDLPSAPFVPRDAQRHDVELLESSFPAI
LRDFGAVSWDFSGTTPPPRGWSPPLAPGCYQLLLYQAGRCQPSNCRRCPGAYRALRGL
RSFMSANTFGNAGFSVLLPGARLEGRCGPTNARVRCHLGLKIPPGCELVVGGEPQCWA
EGHCLLVDDSFLHTVAHNGSPEDGPRVVFIVDLWHPNVAGAERQALDFVFAPDP"
BASE COUNT 233 a 402 c 469 g 236 t
ORIGIN
1 gaggggagag ggagcttcag cgtggagaga ggaccgcgga aggagagaga gacagcccag
61 agtggaatgt ggaagggaaa cagtccagcg gggagccagg gggcagccat ggaagggaca
121 ggtggggagc tggggggaca ggggaactgg ggtccggagg acgccccagg cctcttggcc
181 agggcctccc tgatcatgct cccgtggcca ctacccctgg cctcctcggc cctcaccttg
241 ctcttcgggg ccctcacttc cctgttcctc tggtactgct accgcctggg ctcccaagac
301 atgcaggccc taggggctgg gagccgagct gggggtgttc gtggtgggcc tgtgggatgc
361 tcggaggccg gcgggccaag cccagggggt cctggggatc ccggggaagg acctaggacg
421 gaaggcctag tgagccggcg gcttcgggcc tacgcaaggc gctactcctg ggctgggatg
481 ggtagagtga ggcgggcagc tcagggtggc ccaggccctg ggagagggcc aggggtccta
541 ggtattcagc gcccaggcct gcttttccta ccagacctgc cttcagcccc ctttgtgccg
601 cgggacgccc agcggcacga cgtggagctc ctggagagca gcttccctgc cattttgcgg
661 gacttcgggg ctgtgagctg ggacttctca gggactaccc ctccgcctcg gggctggtcc
721 ccacctctgg cccccgggtg ctaccagctc ctgctgtacc aagcaggccg gtgccaaccc
781 agcaactgcc gccggtgccc gggggcctat cgggcactga gggggcttcg aagctttatg
841 agtgccaaca ccttcggcaa tgccggcttt tccgttctcc tgcctggggc ccggctcgag
901 ggccgctgtg ggcccaccaa tgcccgggtc agatgccatc tgggcctaaa gatccctcct
961 ggctgtgagc tggtggtcgg cggtgagccc cagtgctggg ctgaggggca ctgtctactg
1021 gtggacgact cttttctaca cacagtggct cacaatggct cccccgaaga tgggcctcga
1081 gtggtcttca tcgtggacct ctggcacccc aacgtggcag gggctgagcg ccaggccctc
1141 gactttgtct tcgccccaga cccttgaagg aaggtgctcc cttcacacac ccaggctgga
1201 gagacactgc gctcagggac ggcttgatgg tagccaggac ctcctctcta ctgcgggggt
1261 gggcgggggc ggaggatggg aactggctag tgagcactga aatataaatt ctgaatcctc
1321 aaaaaaaaaa aaaaaaaaaa
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