LOCUS BC084583 3428 bp mRNA linear HUM 27-OCT-2006
DEFINITION Homo sapiens SEC31 homolog A (S. cerevisiae), mRNA (cDNA clone
MGC:90305 IMAGE:6196402), complete cds.
ACCESSION BC084583
VERSION BC084583.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3428)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3428)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-OCT-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: n Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41349438.
FEATURES Location/Qualifiers
source 1..3428
/db_xref="H-InvDB:HIT000266091"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:90305 IMAGE:6196402"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3428
/gene="SEC31A"
/gene_synonym="ABP125"
/gene_synonym="ABP130"
/gene_synonym="HSPC275"
/gene_synonym="HSPC334"
/gene_synonym="KIAA0905"
/db_xref="GeneID:22872"
/db_xref="HGNC:HGNC:17052"
/db_xref="MIM:610257"
CDS 37..3357
/gene="SEC31A"
/gene_synonym="ABP125"
/gene_synonym="ABP130"
/gene_synonym="HSPC275"
/gene_synonym="HSPC334"
/gene_synonym="KIAA0905"
/codon_start=1
/product="SEC31 homolog A (S. cerevisiae)"
/protein_id="AAH84583.1"
/db_xref="GeneID:22872"
/db_xref="HGNC:HGNC:17052"
/db_xref="MIM:610257"
/translation="MKLKEVDRTAMQAWSPAQNHPIYLATGTSAQQLDATFSTNASLE
IFELDLSDPSLDMKSCATFSSSHRYHKLIWGPYKMDSKGDVSGVLIAGGENGNIILYD
PSKIIAGDKEVVIAQNDKHTGPVRALDVNIFQTNLVASGANESEIYIWDLNNFATPMT
PGAKTQPPEDISCIAWNRQVQHILASASPSGRATVWDLRKNEPIIKVSDHSNRMHCSG
LAWHPDVATQMVLASEDDRLPVIQMWDLRFASSPLRVLENHARGILAIAWSMADPELL
LSCGKDAKILCSNPNTGEVLYELPTNTQWCFDIQWCPRNPAVLSAASFDGRISVYSIM
GGSTDGLRQKQVDKLSSSFGNLDPFGTGQPLPPLQIPQQTAQHSIVLPLKKPPKWIRR
PVGASFSFGGKLVTFENVRMPSHQGAEQQQQQHHVFISQVVTEKEFLSRSDQLQQAVQ
SQGFINYCQKKIDASQTEFEKNVWSFLKVNFEDDSRGKYLELLGYRKEDLGKKIALAL
NKVDGANVALKDSDQVAQSDGEESPAAEEQLLGEHIKEEKEESEFLPSSGGTFNISVS
GDIDGLITQALLTGNFESAVDLCLHDNRMADAIILAIAGGQELLARTQKKYFAKSQSK
ITRLITAVVMKNWKEIVESCDLKNWREALAAVLTYAKPDEFSALCDLLGTRLENEGDS
LLQTQACLCYICAGNVEKLVACWTKAQDGSHPLSLQDLIEKVVILRKAVQLTQAMDTS
TVGVLLAAKMSQYANLLAAQGSIAAALAFLPDNTNQPNIMQLRDRLCRAQGEPVAGHE
SPKIPYEKQQLPKGRPGPVAGHHQMPRVQTQQYYPHGENPPPPGFIMHGNVNPNAAGQ
LPTSPGHMHTQVPPYPQPQRPQNGWNDPPALNRVPKKKKMPENFMPPVPITSPIMNPL
GDPQSQMLQQQPSAPVPLSSQSSFPQPHLPGGQPFHGVQQPLGQTGMPPSFSKPNIEG
APGAPIGNTFQHVQSLPTKKITKKPIPDEHLILKTTFEDLIQRCLSSATDPQTKRKLD
DASKRLEFLYDKLREQTLSPTITSGLHNIARSIETRNYSEGLTMHTHIVSTSNFSETS
AFMPVLKVVLTQANKLGV"
BASE COUNT 999 a 797 c 761 g 871 t
ORIGIN
1 cgcaggatcc ggctgccgaa ggtcctcgcc agcaggatga agttaaagga agtagatcgt
61 acagccatgc aggcatggag ccctgcccag aatcacccca tttacctagc aacaggaaca
121 tctgctcagc aattggatgc aacatttagt acgaatgctt cccttgagat atttgaatta
181 gacctctctg atccatcctt ggatatgaaa tcttgtgcca cattctcctc ttctcacagg
241 taccacaagt tgatttgggg gccttataaa atggattcca aaggagatgt ctctggagtt
301 ctgattgcag gtggtgaaaa tggaaatatt attctctatg atccttctaa aattatagct
361 ggagacaagg aagttgtgat tgcccagaat gacaagcata ctggcccagt gagagccttg
421 gatgtgaaca ttttccagac taatctggta gcttctggtg ctaatgaatc tgaaatctac
481 atatgggatc taaataattt tgcaacccca atgacaccag gagccaaaac acagccgcca
541 gaagatatca gctgcattgc atggaacaga caagttcagc atattttagc atcagccagt
601 cccagtggcc gggccactgt atgggatctt agaaaaaatg agccaatcat caaagtcagt
661 gaccatagta acagaatgca ttgttctggg ttggcatggc atcctgatgt tgctactcag
721 atggtccttg cctccgagga tgaccggtta ccagtgatcc agatgtggga tcttcgattt
781 gcttcctctc cacttcgtgt cctggaaaac catgccaggg ggattttggc aattgcttgg
841 agcatggcag atcctgaatt gttactgagc tgtggaaaag atgctaagat tctctgctcc
901 aatccaaaca caggagaggt gttatatgaa cttcccacca acacacagtg gtgcttcgat
961 attcagtggt gtccccgaaa tcctgctgtc ttatcagctg cttcgtttga tgggcgtatc
1021 agtgtttatt ctatcatggg aggaagcaca gatggtttaa gacagaaaca agttgacaag
1081 ctttcatcat cttttgggaa tcttgatccc tttggcacag gacagcccct tcctccgtta
1141 caaattccac agcagactgc tcagcatagt atagtgctgc ctctgaagaa gccgcccaag
1201 tggattcgaa ggcctgttgg tgcttctttt tcatttggag gcaaactggt tacgtttgag
1261 aatgtcagaa tgccttctca tcagggagct gagcagcagc agcagcagca ccatgtgttc
1321 attagtcagg ttgtaacaga aaaggagttc ctcagccgat cagaccaact tcagcaggct
1381 gtgcagtcac aaggatttat caattattgc caaaaaaaaa ttgatgcttc tcagactgaa
1441 tttgagaaaa atgtgtggtc ctttttgaag gtaaactttg aggatgattc tcgtggaaaa
1501 taccttgaac ttctaggata cagaaaagaa gatctaggaa agaagattgc tttggccttg
1561 aacaaagtgg atggagccaa tgtggctctt aaagactctg accaagtagc acagagtgat
1621 ggggaggaga gccctgctgc tgaagagcag ctcttgggag agcacattaa agaggaaaaa
1681 gaagaatctg aatttctacc ctcatctgga ggaacattta atatctctgt cagtggggac
1741 attgatggtt taattactca ggctttgctg acgggcaatt ttgagagtgc tgttgacctt
1801 tgtttacatg ataaccgcat ggccgatgcc attatattgg ccatagcagg tggacaagaa
1861 ctcttggctc gaacccagaa aaaatacttc gcaaaatccc aaagcaaaat taccaggctc
1921 atcactgcag tggtgatgaa gaactggaaa gagattgttg agtcttgtga tcttaaaaat
1981 tggagagagg ctttagctgc agtattgact tatgcaaagc cggatgaatt ttcagccctt
2041 tgtgatcttt tgggaaccag gcttgaaaat gaaggagata gcctcctgca gactcaagca
2101 tgtctctgct atatttgtgc agggaatgta gagaaattag ttgcatgttg gactaaagct
2161 caagatggaa gccacccttt gtcacttcag gatctgattg agaaagttgt catcctgcga
2221 aaagctgtgc aactcactca agccatggac actagtactg taggagttct cttggctgcg
2281 aagatgagtc agtatgccaa tttgttggca gctcagggca gtattgctgc agccttggct
2341 tttcttcctg acaacaccaa ccagccaaat atcatgcagc ttcgtgacag actttgtaga
2401 gcacaaggag agcctgtagc aggacatgaa tcacctaaaa ttccgtacga gaaacagcag
2461 ctccccaagg gcaggcctgg accagttgct ggccaccacc agatgccaag agttcaaact
2521 caacaatatt atccccatgg agaaaatcct ccacctccgg gtttcataat gcatggaaat
2581 gttaatccaa atgctgctgg tcagcttccc acatctccag gtcatatgca cacccaggta
2641 ccaccttatc cacagccaca gcgtcctcag aatggttgga atgaccctcc agctttgaac
2701 agagtaccca aaaagaagaa gatgcctgaa aacttcatgc ctcctgttcc catcacatca
2761 ccaatcatga acccgttggg tgacccccag tcacaaatgc tgcagcaaca gccttcagct
2821 ccagtaccac tgtcaagcca gtcttcattc ccacagccac atcttccagg tggccagccc
2881 ttccatggcg tacagcaacc tcttggtcaa acaggcatgc caccatcttt ttcaaagccc
2941 aatattgaag gtgccccagg ggctcctatt ggaaatacct tccagcatgt gcagtctttg
3001 ccaacaaaaa aaattaccaa gaaacctatt ccagatgagc acctcattct aaagaccaca
3061 tttgaggatc ttattcagcg ctgcctttct tcagcaacag accctcaaac caagaggaag
3121 ctagatgatg ccagcaaacg tttggagttt ctgtatgata aacttaggga acagacactt
3181 tcaccaacaa tcaccagtgg tttacacaac attgcaagaa gcattgaaac tcgaaactac
3241 tcagaaggat tgaccatgca tacccacata gttagcacca gcaacttcag tgagacctct
3301 gctttcatgc cagttctcaa agttgttctc acccaggcca ataagctggg tgtctaaaag
3361 gacagcttct cttccactca atattgccat ttttccaaag aaacatgtta aaaaaaaaaa
3421 aaaaaaaa
//