LOCUS BC084575 1242 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens PDZ and LIM domain 7 (enigma), mRNA (cDNA clone
MGC:99612 IMAGE:6729368), complete cds.
ACCESSION BC084575
VERSION BC084575.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1242)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1242)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-OCT-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: p Column: 6.
FEATURES Location/Qualifiers
source 1..1242
/db_xref="H-InvDB:HIT000266083"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:99612 IMAGE:6729368"
/tissue_type="Breast, adenocarcinoma"
/clone_lib="NIH_MGC_107"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1242
/gene="PDLIM7"
/db_xref="GeneID:9260"
/db_xref="HGNC:HGNC:22958"
/db_xref="MIM:605903"
CDS 68..931
/gene="PDLIM7"
/codon_start=1
/product="PDLIM7 protein"
/protein_id="AAH84575.1"
/db_xref="GeneID:9260"
/db_xref="HGNC:HGNC:22958"
/db_xref="MIM:605903"
/translation="MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGV
AVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLGLSRAQPVQSKPQKASAPAADPP
RYTFAPSVSLNKTARPFGAPPPADSAPQQNGQPLRPLVPDASKQRLMENTEDWRPRPG
TGQSRSFRILAHLTGTEFMQDPDEEHLKKSRPYRPQPYQPPALGCGPCVCRALCPGQN
EHSADPAQPAGHAHAAAEPHLHCAGSCRRGARRGQQQRQDSRVSPVPQGHPGPLPGGA
GPRVPPGGVCV"
BASE COUNT 254 a 409 c 395 g 184 t
ORIGIN
1 cccaacgagg ctccctggag cccgacgcag agcagcgccc tggccgggcc aagcaggagc
61 cggcatcatg gattccttca aagtagtgct ggaggggcca gcaccttggg gcttccggct
121 gcaagggggc aaggacttca atgtgcccct ctccatttcc cggctcactc ctgggggcaa
181 agcggcgcag gccggagtgg ccgtgggtga ctgggtgctg agcatcgatg gcgagaatgc
241 gggtagcctc acacacatcg aagctcagaa caagatccgg gcctgcgggg agcgcctcag
301 cctgggcctc agcagggccc agccggttca gagcaaaccg cagaaggcct ccgcccccgc
361 cgcggaccct ccgcggtaca cctttgcacc cagcgtctcc ctcaacaaga cggcccggcc
421 ctttggggcg cccccgcccg ctgacagcgc cccgcagcag aatggacagc cgctccgacc
481 gctggtccca gatgccagca agcagcggct gatggagaac acagaggact ggcggccgcg
541 gccggggaca ggccagtcgc gttccttccg catccttgcc cacctcacag gcaccgagtt
601 catgcaagac ccggatgagg agcacctgaa gaaatcaagg ccctaccgcc cccagcccta
661 ccagccgccc gccctgggct gtggaccctg cgtttgccga gcgctatgcc ccggacaaaa
721 cgagcacagt gctgacccgg cacagccagc cggccacgcc cacgccgctg cagagccgca
781 cctccattgt gcaggcagct gccggagggg tgccaggagg gggcagcaac aacggcaaga
841 ctcccgtgtg tcaccagtgc cacaaggtca tccggggccg ctacctggtg gcgctgggcc
901 acgcgtacca cccggaggag tttgtgtgta gccagtgtgg gaaggtcctg gaagagggtg
961 gcttctttga ggagaagggc gccatcttct gcccaccatg ctatgacgtg cgctatgcac
1021 ccagctgtgc caagtgcaag aagaagatta caggcgtgag tagggctggc tggcggggag
1081 gtggtcccaa gcctgtcagt gggaacgagg gctgctggga aacccacagt ccaggtctct
1141 ccccgagtga gccctccggg tccttaccag cgtaataaat gggctgctgt actggcctca
1201 ccctgcatta gtcaggatgc tcttaaaaaa aaaaaaaaaa aa
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