LOCUS BC084574 1400 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens keratin 19, mRNA (cDNA clone MGC:99486 IMAGE:6730698),
complete cds.
ACCESSION BC084574
VERSION BC084574.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1400)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1400)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-OCT-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: p Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40217850.
FEATURES Location/Qualifiers
source 1..1400
/db_xref="H-InvDB:HIT000266082"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:99486 IMAGE:6730698"
/tissue_type="Breast, adenocarcinoma"
/clone_lib="NIH_MGC_107"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1400
/gene="KRT19"
/gene_synonym="CK19"
/gene_synonym="K19"
/gene_synonym="K1CS"
/db_xref="GeneID:3880"
/db_xref="HGNC:HGNC:6436"
/db_xref="MIM:148020"
CDS 45..1247
/gene="KRT19"
/gene_synonym="CK19"
/gene_synonym="K19"
/gene_synonym="K1CS"
/codon_start=1
/product="keratin 19"
/protein_id="AAH84574.2"
/db_xref="GeneID:3880"
/db_xref="HGNC:HGNC:6436"
/db_xref="MIM:148020"
/translation="MTSYSYRQSSATSSFGGLGGGSVRFGPGVAFRAPSIHGGSGGRG
VSVSSARFVSSSSSGGYGGGYGGVLTASDGLLAGNEKLTMQNLNDRLASYLDKVRALE
AANGELEVKIRDWYQKQGPGPSRDYSHYYTTIQDLRDKILGATIENSRIVLQIDNARL
AADDFRTKFETEQALRMSVEADINGLRRVLDELTLARTDLEMQIEGLKEELAYLKKNH
EEEISTLRGQVGGQVSVEVDSAPGTDLAKILSDMRSQYEVMAEQNRKDAEAWFTSRTE
ELNREVAGHTEQLQMSRSEVTDLRRTLQGLEIELQSQLSMKAALEDTLAETEARFGAQ
LAHIQALISGIEAQLGDVRADSERQNQEYQRLMDIKSRLEQEIATYRSLLEGQEDHYN
NLSASKVL"
BASE COUNT 309 a 399 c 448 g 244 t
ORIGIN
1 cagcttctga gaccagggtt gctccgtccg tgctccgcct cgccatgact tcctacagct
61 atcgccagtc gtcggccacg tcgtccttcg gaggcctggg cggcggctcc gtgcgttttg
121 ggccgggggt cgcttttcgc gcgcccagca ttcacggggg ctccggcggc cgcggcgtat
181 ccgtgtcctc cgcccgcttt gtgtcctcgt cctcctcggg gggctacggc ggcggctacg
241 gcggcgtcct gaccgcgtcc gacgggctgc tggcgggcaa cgagaagcta accatgcaga
301 acctcaacga ccgcctggcc tcctacctgg acaaggtgcg cgccctggag gcggccaacg
361 gcgagctaga ggtgaagatc cgcgactggt accagaagca ggggcctggg ccctcccgcg
421 actacagcca ctactacacg accatccagg acctgcggga caagattctt ggtgccacca
481 ttgagaactc caggattgtc ctgcagatcg acaacgcccg tctggctgca gatgacttcc
541 gaaccaagtt tgagacggaa caggctctgc gcatgagcgt ggaggccgac atcaacggcc
601 tgcgcagggt gctggatgag ctgaccctgg ccaggaccga cctggagatg cagatcgaag
661 gcctgaagga agagctggcc tacctgaaga agaaccatga ggaggaaatc agtacgctga
721 ggggccaagt gggaggccag gtcagtgtgg aggtggattc cgctccgggc accgatctcg
781 ccaagatcct gagtgacatg cgaagccaat atgaggtcat ggccgagcag aaccggaagg
841 atgctgaagc ctggttcacc agccggactg aagaattgaa ccgggaggtc gctggccaca
901 cggagcagct ccagatgagc aggtccgagg ttactgacct gcggcgcacc cttcagggtc
961 ttgagattga gctgcagtca cagctgagca tgaaagctgc cttggaagac acactggcag
1021 aaacggaggc gcgctttgga gcccagctgg cgcatatcca ggcgctgatc agcggtattg
1081 aagcccagct gggcgatgtg cgagctgata gtgagcggca gaatcaggag taccagcggc
1141 tcatggacat caagtcgcgg ctggagcagg agattgccac ctaccgcagc ctgctcgagg
1201 gacaggaaga tcactacaac aatttgtctg cctccaaggt cctctgaggc agcaggctct
1261 ggggcttctg ctgtcctttg gagggtgtct tctgggtaga gggatgggaa ggaagggacc
1321 cttacccccg gctcttctcc tgacctgcca ataaaaattt atggtccaag ggaaaaaaaa
1381 aaaaaaaaaa aaaaaaaaaa
//