LOCUS BC084549 2436 bp mRNA linear HUM 14-APR-2006
DEFINITION Homo sapiens cDNA clone IMAGE:5441891.
ACCESSION BC084549
VERSION BC084549.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2436)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2436)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-OCT-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: f Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction.
FEATURES Location/Qualifiers
source 1..2436
/db_xref="H-InvDB:HIT000266058"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5441891"
/tissue_type="Brain, astrocytoma, grade IV"
/clone_lib="NIH_MGC_98"
/lab_host="DH10B"
/note="Vector: pOTB7"
BASE COUNT 417 a 755 c 762 g 502 t
ORIGIN
1 cacgagggcg ggctcccagg cctaggcgcc catgacccct acgccaacag ccgcctggac
61 accgccgccg ccactgcgac ctagcgccgc cgccgccggg gcccaatgcc ggtcatgccc
121 attccgcggc gggtgcgctc cttccacggc ccgcacacca cctgcctgca tgcggcctgc
181 gggcccgtgc gcgcctccca cctggcccgc accaagtaca acaacttcga cgtgtacatc
241 aagacgcgct ggctgtacgg cttcatccgc ttcctactct actttagctg cagcctgttc
301 actgcggcgc tctggggtgc gctggccgcc ctcttctgcc tacagtacct gggcgttcgc
361 gtcctgctgc gcttccagcg caagctgtcg gtgctgctgc tgctgctggg ccgccggcgc
421 gtggacttcc gcctggtgaa cgagctgctc gtctatggca tccacgtcac catgctgctg
481 gtcgggggcc tgggctggtg cttcatggtc ttcgtggaca tgtgagggcc gtgggtgcga
541 gcttgatgta tcgtcccggc ctgtggctgt gttctctcca tgggtggggt cggccagcgc
601 cttcccttcg cccatccccc aggcagtcgc tgctgcccgg cgcccacgga gagaaaagaa
661 agggctgaga cttctgtgat gggggcgcgg acaccacccc taggctggct tcctggaccc
721 accctccccg tatgcactct caggggcagc gcccacctgc cggtggctcc tgctcacatg
781 tcttcgggtc gtactgcggg gtgggccctc cgttccgcct ctctgtgggc ctctctccag
841 gaccacagct gccagggact ttagacatca ccctgggagg cccctggaca cagagggctg
901 tgtgcccagg agcaattccg gaggggggcc ctcctggctg cacagcccct tctgcgtgcc
961 ctggccccag ccccagccaa cgggacacgg aaggctcccc tcgctgacac accacactgc
1021 cacaaagctg cttactctgc cctgggccgc ctgaggcctg gcactgcccg cggaccaccc
1081 tgtgtgtgtc atcctgaggg gctgtgtggg tcctgagtcc ccagccagcc ttcagggtcc
1141 ccttggattg tgtagatgca gtctagcggg gggccggaga agggctcagg tgggaggggc
1201 ctcagcaggc tcccagctca ggggctggcc tggggggaac cctgggagcc aggggctgac
1261 tccagcaaca ctggcctgtc tgcctgttct gggagggctg tgaggatgtc ttgcagatgc
1321 tctggatttc tgcggaggca cctccattcc tttctggctt tttttgcggg ggagggcttt
1381 gggcctcttt ctttgaggga acaccgtcaa agaaagcctg ggagatcgag gcttcagtga
1441 gccaggatgg aaacgcgtgt cccaagtgtc cggagcaggc ggcagaggcc tcagtgcggc
1501 aaacacagcc ccagagcctg tgtggcacca gcagcatctt agagccccag gtatatgctg
1561 agatcttatc tcacgctgtc ctccagtgtc tggggggccc aaatgatggc acaggggcag
1621 gtgggctgga ggggcgcaga tgcctgtgtt cagggagggt ggccaccatg ggccgaggtc
1681 tcacccagga ccccttgctc tgctcctcag ccttgcagtc acggcagcac tatggtggac
1741 tgcccatggc cgtgtgactt tgggggcaag tgggagggcg ccctgaataa tgattgcaag
1801 gacaacaggc agaggctacc ctagagcagg acacagggtg tggtactgac aaccctagtg
1861 tcacctcaaa tccatgtccc cacactctgg gcatgggtgg gacttgtgac cctaccctgt
1921 caggcggacc agtggcccag gagccatgag gacagttgtg tgccactgga agagaaactt
1981 tttgaaaaac cctaaatcag gtagagaaag caaaaaatct ctggccgtaa accgtgctct
2041 ctaatttatc ggcagcttct gtggatgacc tctgatgagc ccgggctgcg tccacgccct
2101 gggcaggtag gcgggagctt ccctgcgtgg gcctcatttc ttgctgcaga gaatcttttg
2161 cactaagtca tgctgtttcc tcaaagaagc tttgtttttt gttaacgtat tactcagagt
2221 cacccaagcc tcttggctga gggtgaaggt gggacgggag gcgggagggg gctggtggtg
2281 ccgctcgtgc ggtgtcaacg ctgcagggag ttgtggcacc ttggtgccct ctgagcacct
2341 ggccgcctgc tgtccccggt gcctgtgaaa ttcgtcatgc catgacccac ctgcattaaa
2401 cctatttttt taatgtgaaa aaaaaaaaaa aaaaaa
//