LOCUS BC084537 1831 bp mRNA linear HUM 22-DEC-2006
DEFINITION Homo sapiens hexosaminidase A (alpha polypeptide), mRNA (cDNA clone
MGC:99608 IMAGE:5459166), complete cds.
ACCESSION BC084537
VERSION BC084537.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1831)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1831)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-OCT-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: g Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13128865.
FEATURES Location/Qualifiers
source 1..1831
/db_xref="H-InvDB:HIT000266046"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:99608 IMAGE:5459166"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_47"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1831
/gene="HEXA"
/gene_synonym="TSD"
/db_xref="GeneID:3073"
/db_xref="HGNC:HGNC:4878"
/db_xref="MIM:606869"
CDS 8..1597
/gene="HEXA"
/gene_synonym="TSD"
/codon_start=1
/product="hexosaminidase A (alpha polypeptide)"
/protein_id="AAH84537.1"
/db_xref="GeneID:3073"
/db_xref="HGNC:HGNC:4878"
/db_xref="MIM:606869"
/translation="MTSSRLWFSLLLAAAFAGRATALWPWPQNFQTSDQRYVLYPNNF
QFQYDVSSAAQPGCSVLDEAFQRYRDLLFGSGSWPRPYLTGKRHTLEKNVLVVSVVTP
GCNQLPTLESVENYTLTINDDQCLLLSETVWGALRGLETFSQLVWKSAEGTFFINKTE
IEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESFTF
PELMRKGSYNPVTHIYTAQDVKEVIEYARLRGIRVLAEFDTPGHTLSWGPGIPGLLTP
CYSGSEPSGTFGPVNPSLNNTYEFMSTFFLEVSSVFPDFYLHLGGDEVDFTCWKSNPE
IQDFMRKKGFGEDFKQLESFYIQTLLDIVSSYGKGYVVWQEVFDNKVKIQPDTIIQVW
REDIPVNYMKELELVTKAGFRALLSAPWYLNRISYGPDWKDFYVVEPLAFEGTPEQKA
LVIGGEACMWGEYVDNTNLVPRLWPRAGAVAERLWSNKLTSDLTFAYERLSHFRCELL
RRGVQAQPLNVGFCEQEFEQT"
BASE COUNT 427 a 472 c 479 g 453 t
ORIGIN
1 gcgggccatg acaagctcca ggctttggtt ttcgctgctg ctggcggcag cgttcgcagg
61 acgggcgacg gccctctggc cctggcctca gaacttccaa acctccgacc agcgctacgt
121 cctttacccg aacaactttc aattccagta cgatgtcagc tcggccgcgc agcccggctg
181 ctcagtcctc gacgaggcct tccagcgcta tcgtgacctg cttttcggtt ccgggtcttg
241 gccccgtcct tacctcacag ggaaacggca tacactggag aagaatgtgt tggttgtctc
301 tgtagtcaca cctggatgta accagcttcc tactttggag tcagtggaga attataccct
361 gaccataaat gatgaccagt gtttactcct ctctgagact gtctggggag ctctccgagg
421 tctggagact tttagccagc ttgtttggaa atctgctgag ggcacattct ttatcaacaa
481 gactgagatt gaggactttc cccgctttcc tcaccggggc ttgctgttgg atacatctcg
541 ccattacctg ccactctcta gcatcctgga cactctggat gtcatggcgt acaataaatt
601 gaacgtgttc cactggcatc tggtagatga tccttccttc ccatatgaga gcttcacttt
661 tccagagctc atgagaaagg ggtcctacaa ccctgtcacc cacatctaca cagcacagga
721 tgtgaaggag gtcattgaat acgcacggct ccggggtatc cgtgtgcttg cagagtttga
781 cactcctggc cacactttgt cctggggacc aggtatccct ggattactga ctccttgcta
841 ctctgggtct gagccctctg gcacctttgg accagtgaat cccagtctca ataataccta
901 tgagttcatg agcacattct tcttagaagt cagctctgtc ttcccagatt tttatcttca
961 tcttggagga gatgaggttg atttcacctg ctggaagtcc aacccagaga tccaggactt
1021 tatgaggaag aaaggcttcg gtgaggactt caagcagctg gagtccttct acatccagac
1081 gctgctggac atcgtctctt cttatggcaa gggctatgtg gtgtggcagg aggtgtttga
1141 taataaagta aagattcagc cagacacaat catacaggtg tggcgagagg atattccagt
1201 gaactatatg aaggagctgg aactggtcac caaggccggc ttccgggccc ttctctctgc
1261 cccctggtac ctgaaccgta tatcctatgg ccctgactgg aaggatttct acgtagtgga
1321 acccctggca tttgaaggta cccctgagca gaaggctctg gtgattggtg gagaggcttg
1381 tatgtgggga gaatatgtgg acaacacaaa cctggtcccc aggctctggc ccagagcagg
1441 ggctgttgcc gaaaggctgt ggagcaacaa gttgacatct gacctgacat ttgcctatga
1501 acgtttgtca cacttccgct gtgagttgct gaggcgaggt gtccaggccc aacccctcaa
1561 tgtaggcttc tgtgagcagg agtttgaaca gacctgagcc ccaggcaccg aggagggtgc
1621 tggctgtagg tgaatggtag tggagccagg cttccactgc atcctggcca ggggacggag
1681 ccccttgcct tcgtgcccct tgcctgcgtg cccctgtgct tggagagaaa ggggccggtg
1741 ctggcgctcg cattcaataa agagtaatgt ggcatttttc tataaaaaaa aaaaaaaaaa
1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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