LOCUS BC082982 1999 bp mRNA linear HUM 20-OCT-2004
DEFINITION Homo sapiens SH2 domain containing 4A, mRNA (cDNA clone MGC:99522
IMAGE:6575224), complete cds.
ACCESSION BC082982
VERSION BC082982.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1999)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1999)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: n Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361890.
FEATURES Location/Qualifiers
source 1..1999
/db_xref="H-InvDB:HIT000266019"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:99522 IMAGE:6575224"
/tissue_type="Prostate, carcinoma"
/clone_lib="NIH_MGC_40"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1999
/gene="SH2D4A"
/gene_synonym="FLJ20967"
/gene_synonym="SH2A"
/db_xref="GeneID:63898"
CDS 309..1673
/gene="SH2D4A"
/gene_synonym="FLJ20967"
/gene_synonym="SH2A"
/codon_start=1
/product="SH2D4A protein"
/protein_id="AAH82982.1"
/db_xref="GeneID:63898"
/translation="MLKQILSEMYIDPDLLAELSEEQKQILFFKMREEQIRRWKEREA
AMERKESLPVKPRPKKENGKSVHWKLGADKEVWVWVMGEHHLDKPYDVLCNEIIAERA
RLKAEQEAEEPRKTHSEEFTNSLKTKSQYHDLQAPDNQQTKDIWKKVAEKEELEQGSR
PAPTLEEEKIRSLSSSSRNIQQMLADSINRMKAYAFHQKKESMKKKQDEEINQIEEER
TKQICKSWKEDSEWQASLRKSKAADEKRRSLAKQAREDYKRLSLGAQKGRGGERLQNP
LRVPQKPERPPLPPKPQFLNSGAYPQKPLRNQGVVRTLSSSAQEDIIRWFKEEQLPLR
AGYQKTSDTIAPWFHGILTLKKANELLLSTGMPGSFLIRVSERIKGYALSYLSEDGCK
HFLIDASADAYSFLGVDQLQHATLADLVEYHKEEPITSLGKELLLYPCGQQDQLPDYL
ELFE"
BASE COUNT 635 a 455 c 514 g 395 t
ORIGIN
1 cggcgcccgg ggcgggctca ggtgcggggt tgggcggcga gagcggccgc ggcgggtgtc
61 cggtgtccgg tgtccggtgt ccggtgtctg gagccgctgg ctaggttcag tgaacagcat
121 tttggacagg acatttggtg ccaggtctga gtagccagtt tgctgaatta ttgtcccagt
181 cagccaggat tgtgagctgt ttgggaagtt tcgtggaaac gcccaagtgc cagcacaggt
241 ggagggacac ctggaggcca gtttcaggaa cttttgccac aagtataaaa gacttcagaa
301 gtgcaaagat gctgaaacag atactgtcgg agatgtacat agatcctgat ctactggcag
361 agctcagcga agaacagaaa cagatcctgt tcttcaagat gagagaggaa cagatccgac
421 gatggaaaga aagagaagca gctatggaaa gaaaggagtc cctgccagtg aaacccagac
481 caaagaaaga gaatggcaaa tcggttcatt ggaaacttgg agctgataag gaagtctggg
541 tatgggtgat gggcgaacac catctagata aaccctatga tgtgctctgt aatgaaatta
601 ttgctgagag ggcccggctg aaagcagaac aggaggcaga agagcccaga aaaactcact
661 ctgaagaatt caccaatagc ttgaaaacaa aatcacagta ccatgatctg caggctccgg
721 ataaccagca gactaaagac atctggaaga aagtggcaga aaaggaggaa ctggagcaag
781 gatcgaggcc agcaccaacc ctggaagaag agaaaatccg atcactctcc agttcttcaa
841 gaaatattca acaaatgttg gcagattcaa tcaatcgtat gaaggcatat gcatttcacc
901 agaagaaaga atctatgaag aaaaaacaag atgaagaaat aaatcaaata gaagaagaga
961 gaacgaagca gatttgtaag agctggaaag aagactcgga atggcaggca tctctgcgaa
1021 aatccaaagc agctgatgag aagagacgct ccttggctaa acaagcacga gaagactaca
1081 agaggttatc cctcggggcc cagaaaggaa gaggcggtga gaggctgcaa aaccccttgc
1141 gtgttccgca gaaaccagaa agacctcccc ttccacccaa gcctcagttc ctaaactcag
1201 gggcatatcc tcaaaaacct cttagaaatc agggagtggt gaggacactg tccagctctg
1261 cccaagagga catcatccgg tggtttaaag aggagcagct accacttcga gcgggctacc
1321 agaaaacctc agacaccata gccccctggt tccatggaat tctcacactc aagaaagcaa
1381 atgaacttct tctgagcaca ggcatgcccg gcagttttct catccgagtc agtgaaagga
1441 tcaaaggcta tgccctgtcc tatctgtcgg aggacggctg taaacatttc ctcatcgatg
1501 cctctgcaga cgcctacagc ttcctgggcg tggaccagct acagcatgcc accttggcgg
1561 atttggtgga atatcacaag gaggaaccca tcacttccct ggggaaggag ctccttctct
1621 atccctgtgg tcagcaggac cagctgcctg actacctgga gctgtttgag tgacagcctc
1681 catcagggtc atcctacagc ctccaagcgg gctttcccct ggacaaatgc cactgcaaca
1741 tttatgtgtg aagccaaaat caccctgcag cagagccaat actgatcaac tgaaagtaaa
1801 gtatccatgg agtcctcatt gacacctctt ttctgcacaa atactggaat tcaatgtcaa
1861 gagaaaatga cctctgctca aaagggagaa gagtctcaat ttcagcaagt acctgtcatg
1921 aagggtatga ccttaatgat gtacataaaa taaaacaaat gaagaaatgg aaaactttta
1981 gaaaaaaaaa aaaaaaaaa
//