LOCUS BC082976 3600 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens phosphatidylinositol transfer protein, alpha, mRNA
(cDNA clone MGC:99649 IMAGE:6578454), complete cds.
ACCESSION BC082976
VERSION BC082976.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3600)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3600)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: n Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31377785.
FEATURES Location/Qualifiers
source 1..3600
/db_xref="H-InvDB:HIT000266014"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:99649 IMAGE:6578454"
/tissue_type="Ovary, teratocarcinoma"
/clone_lib="NIH_MGC_109"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3600
/gene="PITPNA"
/gene_synonym="VIB1A"
/db_xref="GeneID:5306"
/db_xref="HGNC:HGNC:9001"
/db_xref="MIM:600174"
CDS 172..984
/gene="PITPNA"
/gene_synonym="VIB1A"
/codon_start=1
/product="phosphatidylinositol transfer protein, alpha"
/protein_id="AAH82976.1"
/db_xref="GeneID:5306"
/db_xref="HGNC:HGNC:9001"
/db_xref="MIM:600174"
/translation="MVLLKEYRVILPVSVDEYQVGQLYSVAEASKNETGGGEGVEVLV
NEPYEKDGEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVITNEY
MKEDFLIKIETWHKPDLGTQENVHKLEPEAWKHVEAVYIDIADRSQVLSKDYKAEEDP
AKFKSIKTGRGPLGPNWKQELVNQKDCPYMCAYKLVTVKFKWWGLQNKVENFIHKQER
RLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQLDEMRQKDPVKGMTADD"
BASE COUNT 917 a 884 c 906 g 893 t
ORIGIN
1 cccgggcggc aggagccggc gcggcgaccg cggcgagggc ggcggggacg gagcagagca
61 cgacgaagac gcacaggcag ccgggccggg ccgggccacg gggagagcgg ccggcgggca
121 gcgggcggga ggccgggcgg gccgcgggca gccaccgagc cgcgaagcga catggtgctg
181 ctcaaggagt atcgagtaat cctgcctgtg tctgtagatg agtatcaagt ggggcagctg
241 tattctgtgg ctgaggccag taaaaatgaa acgggtggtg gcgaaggcgt ggaggtcctg
301 gtgaatgagc cctacgagaa ggacggtgag aaaggccagt acacacacaa gatctaccac
361 ctgcagagca aagtacccac gtttgttcga atgctggccc cagagggagc cctgaatata
421 cacgagaaag cctggaatgc ttacccctac tgcagaaccg ttattacaaa tgagtacatg
481 aaagaagact ttctgattaa aattgaaacc tggcacaaac cagatcttgg cacgcaggag
541 aatgtgcata agctggagcc tgaggcgtgg aaacacgtgg aagccgtata tatagacatt
601 gcagatcgaa gccaagtgct cagcaaggat tacaaggcag aggaagaccc agcaaaattt
661 aaatctatca aaacaggccg aggacccttg ggccccaatt ggaagcaaga gcttgtaaac
721 cagaaggact gcccatatat gtgtgcatac aaactggtga ccgtcaagtt caagtggtgg
781 ggcctgcaga acaaagtgga gaacttcatc cataagcaag agaggcgtct gtttacaaac
841 ttccacaggc agctgttctg ttggctcgat aagtgggttg acctgaccat ggacgacatt
901 cgaaggatgg aagaagagac gaagagacag ctggatgaaa tgagacaaaa ggacccagtg
961 aaaggaatga cagcagatga ctaaagccgc ctttcccctc tgcacttttt gcaagacagt
1021 ggtcaacagg aagacccagc agctccaccc tcccaagtga caggccattt tcggacgcag
1081 ccgttctgtg cccattcttc aggcaacttt cgattcctta ctgtagctaa ttctagatgc
1141 ccttcagtat tgtgaacaaa tagaccgtct ggtgtcacag agcccgcgtg tgcaggagcc
1201 tgctcctccg agatacgtgg cgtgtaggtt gctgtagtta cagcgcctcc gtctctctcc
1261 attgtgttcc gatccatttc tgtgtgttcc cccaaccttt atttccaagt gacattttca
1321 gtctttcaaa tagctgcctt ttgtgatgtg gtgatttaaa tgatttaagt tcatttgttc
1381 tcaaccttgg ggtaaactga ggtattttgc ttcctgggaa gatcttcgca attttgagtg
1441 ctcctgtggg gagcggggat gagctaaaga tacaatgttt ccctgccccg caccgcttcc
1501 acaaaatagc aatgtggttt tgcagctctg acttctgctc ccagtaaccc atcgttaggg
1561 cactctagca ctatggaggt acccaaggct cagccagtct ctatttaaga aaatttaaca
1621 aatacgagta accctgtccc aatcactgaa tctctagtta ctactcttag aaacacctgt
1681 ggcttcttgg ccctcctgtt gcccgctctg aatctctctg cagtctacaa aatcgcccca
1741 gtcaactctc cacttggagg gaattgtcca gtgtggcccc tagaattgag tcacccccta
1801 gataccaact gtctgacccc gaggagctct gtaagtccct gctcctcctc ttccctttgg
1861 ggctggtgct gccactcagc aataatcctc ttttctctgt gctttcttag gtccctgtcc
1921 tctgtctttg aggctggtta ggaagcaaga gtcctgatct ttcatgctgc acaatatgag
1981 catgcaaaaa gctttttcca gcagaacatg ttccctcgtc tccagttgcc ggaaaggaat
2041 ttggggatca agaacttagc tcgtcctacc cccatgttga gttctgccct ggaaaaccca
2101 aagcaagtag tgatcatagt acagaacccg accaaagtag gctggtgagg aagtccaggc
2161 tccaggggaa cagacgctgc ccagtgttca tagcttcctg caacttgaca gagcctgagt
2221 ttgcctctta gtgggagaat gagagagagc tgtagtgtca cctgacattc cccaaacctt
2281 gtgaagcacg ttggcctaag tgtgccgtga tcccagccca cactagcctg ggtgcatctg
2341 ctaatgggag accaaatctt tgtccgggaa gcaagaagtg ggtgggagaa tgtatcctgt
2401 ttttgtcagt ttgtttgcct tactcatttc taagtgcaat aagggagtgt ctcacaggat
2461 tgcacctgtg acatcctgat ggatgcttcc ctgtggccct cctggggcaa gggtggacag
2521 actcagaccc ccagcatggt tagcgctgac cttcattgag gtccctttgg aaccagatgt
2581 cttgttacag acaccttcct ctgtgtaagt ctcctcacct tgaggggtct ttagtaatgc
2641 atctgggtag catctcaact gctggtagca tttatctgac ttggaaagtt ggagaagagg
2701 cattcctact ggagaaaaat gtcagtgttt tcctataagc tctgtgttag ctattcatta
2761 tatttgtgct taaagatgtt ccttcattca tcaactaggg gaagtccaga tgcgggttat
2821 cttgaaagaa acaaactgac attctaggca gacagttgtc tatgtggtct gagggtcagc
2881 agctgttagt ctccttcctt tggctcttga gacccacaca tatcacttta gccctaacaa
2941 gggctcctcc cacctccacc tgttgcccca gttgaaaagc atccattatg agctgaggtc
3001 agcctggatc tggaattgca gcccacataa acataaagga ggatgtccct ggtctgttcc
3061 atccccacgg atggtgttgc tgctgggcaa cagtgttggc ttcttttaag tacccccttt
3121 cctcctcacc cacctccaaa ctgactagca ctcagaggga cttatgataa aggttcagct
3181 ccaggggtag tacctgagtg tgtgccatgc cccttcagac cagctgcttc catcagaatt
3241 ccagggtcac agccccaaca gaagcagcag tgcctctgta ggaggggtgc tgggctctgg
3301 ccttctcatg cagagaggtc cgggacaggg tcagtatcgt gggcatgtgt atagcttccc
3361 aagttctttt acagtccctg ctgggactcc ctgacttact ttggttggtt cctagtgcta
3421 cttgttttac aaactacact ttgtagaatt gattagatta ccttgtttat ttaatgtgag
3481 tttgtgcctt tttgtctcaa tcttccaata caggtatatt gagaaaaaaa gcagtctaat
3541 aaaatcctag acagaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//