LOCUS BC082270 3828 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens YEATS domain containing 2, mRNA (cDNA clone
IMAGE:3960342), partial cds.
ACCESSION BC082270
VERSION BC082270.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3828)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3828)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: b Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..3828
/db_xref="H-InvDB:HIT000265984"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3960342"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3828
/gene="YEATS2"
/gene_synonym="FLJ10201"
/gene_synonym="FLJ12841"
/gene_synonym="FLJ13308"
/gene_synonym="KIAA1197"
/db_xref="GeneID:55689"
CDS <1..1769
/gene="YEATS2"
/gene_synonym="FLJ10201"
/gene_synonym="FLJ12841"
/gene_synonym="FLJ13308"
/gene_synonym="KIAA1197"
/codon_start=3
/product="YEATS2 protein"
/protein_id="AAH82270.1"
/db_xref="GeneID:55689"
/translation="QSTAGPGGISQHLTYTSYILKQTPQGTFLVGQPSPQTSGKQLTT
GSVVQGTLGVSTSSAQGQQTLKVISGQKTTLFTQAAHGGQASLMKISDSTLKTVPATS
QLSKPGTTMLRVAGGVITTATSPAVALSANGPAQQSEGMAPVSSSTVSSVTKTSGQQQ
VCVSQATVGTCKAATPTVVSATSLVPTPNPISGKATVSGLLKIHSSQSSPQQAVLTIP
SQLKPLSVNTSGGVQTILMPVNKVVQSFSTSKPPAILPVAAPTPVVPSSAPAAVAKVK
TEPETPGPSCLSQEGQTAVKTEESSELGNYVIKIDHLETIQQLLTAVVKKIPLITAKS
EDASCFSAKSVEQYYGWNIGKRRAAEWQRAMTMRKVLQEILEKNPRFHHLTPLKTKHI
AHWCRCHGYTPPDPESLRNDGDSIEDVLTQIDSEPECPSSFSSADNLCRKLEDLQQFQ
KREPENEEEVDILSLSEPVKINIKKEQEEKQEEVKFYLPPTPGSEFIGDVTQKIGITL
QPVALHRNVYASVVEDMILKATEQLVNDILRQALAVGYQTASHNRIPKEITVSNIHQA
ICNIPFLDFLTNKHMGILNEDQ"
BASE COUNT 1055 a 951 c 998 g 824 t
ORIGIN
1 ctcaaagtac tgctggccct ggagggatat ctcagcacct gacttacaca tcttacatcc
61 tcaagcaaac tccccagggc acatttttag ttggccagcc atcaccccag acttctggaa
121 aacaactcac cactgggtca gtggtccaag gaacactggg agtcagcaca tcttctgcac
181 aaggacaaca aacgctaaaa gtcatctctg gacagaaaac cacattgttt acacaggcag
241 cccatggagg acaggcatct ctaatgaaaa tatccgatag caccttgaag actgtgccag
301 ccacctcaca gctctcgaag cctggaacca caatgctgag agtagcagga ggggttatca
361 caactgccac ttcccctgcc gtggccctct cagcaaacgg tcctgcacaa cagtctgaag
421 gaatggctcc cgtgtcttca tctacggtca gttctgtaac gaaaacttct gggcagcagc
481 aagtgtgtgt gagccaggcc accgtgggaa cctgcaaggc tgccaccccc accgtcgtca
541 gcgccacgtc cctcgtgcct acaccaaacc ccatctctgg gaaagccaca gtatccggac
601 tgttaaagat tcactccagt cagtccagtc cgcagcaggc cgtcctgacg attcccagcc
661 agctcaaacc actcagcgta aacacatctg gaggggtgca gacgatcctg atgcctgtga
721 ataaagtggt tcagtcattt tctaccagca agccacctgc cattctgcct gtagctgccc
781 caactccagt tgtccccagc tctgctccag cagctgttgc aaaagtgaag actgaaccag
841 aaacacctgg accgagttgc ctctctcagg agggtcagac agcagtgaaa acagaagaaa
901 gttctgagct gggaaactat gtcattaaga tagaccattt agaaactatc cagcaactcc
961 taactgcagt agtaaagaag attccattaa tcactgcaaa aagtgaagat gccagctgct
1021 tttctgcaaa gtctgtggag cagtactatg gctggaacat tggaaaaagg agagccgctg
1081 agtggcaaag agcaatgaca atgcgaaaag tcttacaaga aatcctggag aagaatccga
1141 gatttcacca cctgactccc ctcaaaacca agcacatcgc tcactggtgc cgctgtcatg
1201 gctacacccc accggaccct gagagcctga ggaatgacgg ggactccatc gaggacgtgc
1261 tgacccagat cgacagcgag cccgagtgcc catcatcatt ctcctctgct gacaacctct
1321 gccgcaaact ggaggacctg caacagttcc agaaaaggga acccgagaat gaggaggagg
1381 tggacatcct cagcctctcc gagccagtga agataaacat caagaaggag caggaagaga
1441 aacaagagga agtcaagttc tacctgccac caaccccagg gtctgaattt attggggatg
1501 tcacacagaa gattgggatc accctgcagc ccgtggcact ccacaggaac gtgtatgcgt
1561 ccgtggtgga ggacatgatc ctgaaggcta cagaacagct ggtgaatgat atcctgagac
1621 aggctttggc agttggatac cagacagctt ctcacaacag gattcccaaa gaaattacag
1681 tgagtaatat tcaccaggcc atttgcaaca ttccttttct ggacttcctc acaaacaaac
1741 acatgggaat attgaatgag gaccagtgag cggagtgagg tgccctggag aagcaggctt
1801 tgaaggcaca gcgaagctgt aactgaggac cctgctgctt gggaaggagg tggtttccag
1861 tgtgactcgg catgtcatgg ctacccaacc tttgccgctg cctgttccca cgtgtcacca
1921 gcacgctgca ctccagatga aatcctccta ggacaggagt ttgtttcctg agtgtggagt
1981 gaggctgtca gtggatccgt gctttgtcgg ccagcgtttc tgcagtcttt gtaaaggccc
2041 cacgagagcg ggccaggccg tgtgcctcag gcccttctcc ctgggtgtgc ttaagggggc
2101 tccttgggcc cgcctcccca ggaggtagaa aatgagtggc aggctagaga tttcacccat
2161 tttgtgggct ggagttacca gtagctccag cagttaccct gaagagagat tgggcttcag
2221 ccttcagcag gtggttctct cccatgcctg gccttggtgt ggaggggctg tactctgagc
2281 ccaagtgagt cagctatagg aagaggccat acctagagcc aagaaccatg aaggcctgag
2341 agacggcaga ctgagcagaa ttcctttttt gagcacgaga gcattactag aaccattgtc
2401 aaagcagtgg caagggacgg agaggtccca acaggagtca ggaagaggtt tgattataac
2461 caagaaaact cactatgcta ggaatagact gtgtgcacca gtcccagaca cttggcagaa
2521 gtgcagcagc gttacacatg tgtgcgaagc agatcgcagg ttccacgcca tctgcatggc
2581 ctgcaggagc ttctgctgct gaccccatgc tgagtggcca gtggggagcg gcgcccggca
2641 ggctcttctg gggtcgtctg tcctatccgt ggattgtata tactcttctc tgttaaggag
2701 tttttcccaa gaagaaaagt atttaaaaga aataccagtg agtgccttaa agttggagaa
2761 gtaactgccc atgcccagaa ataaggatgc cagtgcccag aagcagtgag attagtctgt
2821 gtccacaagc agaggccccc tcgatgggag ggagtggcag gcaggagaag gtggcgctgc
2881 caggtgcccg ggtctattgg aggcgcccca tctcagactt cctaacacag cctgtgtgga
2941 aggcagaaca aagaatgcat gcccagtcag aaatctgttc tattctgctc caggaaaatc
3001 ggaaacctgt gagtcagagt cagagaaact tacccaagca acgtaattcc tgttttcatg
3061 ggtcctgtag atgtttgagt caggaaggta aggcggggag tgactgaata aactctgcct
3121 tttaaattga gcatctgggc cgggcatggt ggctcacgcc tgtaatccca gcactctggg
3181 aggtcgaggt gggtgggtca cctgaggttg ggagttcgag accagcccga ccaacatggt
3241 gaaaccccgt ctctactaaa aatacagaaa attagctggg catggtggtg tgtgcctgta
3301 attccagcta ctcgggaggc tgaggcagga agaatcactt gaacccagga ggcggaggtt
3361 gcagtgtgcc aagatcatac cactgcactc cagccctggt gacagaggag accccgtctc
3421 aaaaattgat tgatcaattc agcatctgag ggctgcaagt acagaaggaa tctattctca
3481 gcagggcata gggcacgcac tggcttaaca gtttagtata taaggctcaa atagtctata
3541 cctgaactgc tataagcaag gtcgataggg aagtggatag attgcttcag caaagtgaac
3601 tgtgagatct ccaggacaga gggagaaaga tctgatccaa atgagaacag attggttatt
3661 gcaggtatca cagcctaaag aaattatctt tttgcaaaag aaatattaaa tgatttagca
3721 gtctccacgt gtgttaatgt ttcaaacgtg tatcataatg tgtataattg tgtaacaaaa
3781 ttgtctacaa taaatctttt ggtatttgtg aaaaaaaaaa aaaaaaaa
//