LOCUS BC082258 4296 bp mRNA linear HUM 07-AUG-2007
DEFINITION Homo sapiens family with sequence similarity 21, member A, mRNA
(cDNA clone MGC:99697 IMAGE:6278433), complete cds.
ACCESSION BC082258
VERSION BC082258.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4296)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4296)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Mark Watson
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: j Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54124342.
FEATURES Location/Qualifiers
source 1..4296
/db_xref="H-InvDB:HIT000265975"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:99697 IMAGE:6278433"
/tissue_type="Spleen"
/clone_lib="NIH_MGC_113"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..4296
/gene="FAM21A"
/gene_synonym="bA56A21.1"
/db_xref="GeneID:387680"
/db_xref="HGNC:HGNC:23416"
CDS 46..4071
/gene="FAM21A"
/gene_synonym="bA56A21.1"
/codon_start=1
/product="family with sequence similarity 21, member A"
/protein_id="AAH82258.2"
/db_xref="GeneID:387680"
/db_xref="HGNC:HGNC:23416"
/translation="MMNRTTPDQELAPASEPVWERPWSVEEIRRSSQSWSLAADAGLL
QFLQEFSQQTISRTHEIKKQVDGLIRETKATDCRLHNVFNDFLMLSNTQFIENRVYDE
EVEEPVLKAEAEKTEQEKTREQKEVDLIPKVQEAVNYGLQVLDSAFEQLDIKAGNSDS
EEDDANGRVELILEPKDLYIDRPLPYLIGSKLFMEQEDVGLGELSSEEGSVGSDRGSI
VDTEEEKEEEESDEDFAHHSDNEQNRHTTQMSDEEEDDDGCDLFADSEKEEEDIEDIE
ENTRPKRSRPTSFADELAARIKGDAVGRVDEEPTTLPSGEAKPRKTLKEKKERRTPSD
DEEDNLFAPPKLTDEDFSPFGSGGGLFSGGKGLFDDEDEESDLFTEAPQDRQAGASVK
EESSSSKPGKKIPAGAVSVFLGDTDVFGAASVPSMKEPQKPEQPTPRKSPYGPPPTGL
FDDDDGDDDDDFFSAPHSKPSKTGKVQSTADIFGDEEGDLFKEKAVASPEATVSQTDE
NKARAEKKVTLSSSKNLKPSSETKTQKGLFSDEEDSEDLFSSQSASKLKGASLLPGKL
PTLVSLFDDEDEEDNLFGGTAAKKQTLCLQAQREEKAKASELSKKKASALLFSSDEED
QWNIPASQTHLASDSRSKGEPRDSGTLQSQEAKAVKKTSLFEEDEEDDLFAIAKDSQK
KTQRVSLLFEDDVDSGGSLFGSPPTSVPPATKKKETVSEAPPLLFSDEEEKEAQLGVK
SVDKKVESAKESLKFGRTDVAESEKEGLLTRSAQETVKHSDLFSSSSPWDKGTKPRTK
TVLSLFDEEEDKMEDQNIIQAPQKEVGKGRDPDAHPKSTGVFQDEELLFSHKLQKDND
PDVDLFAGTKKTKLLEPSVGSLFGDDEDDDLFSSAKSQPLVQEKKRVVKKDHSVDSFK
NQKHPESIQGSKEKGIWKPETPQDSSGLAPFKTKEPSTRIGKIQANLAINPAALLPTA
ASQISEVKPVLPELAFPSSEHRRSYGLESVPVLPGSGEAGVSFDLPAQADTLHSANKS
RVKMRGKRRPQTRAARRLAAQESSETEDMSVPRGPIAQWADGAISPNGHRPQLRAASG
EDSTEEALAAAAAPWEGGPVPGVDRSPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVE
RTKPKAKIAENPANPPVGGKAKSPMFPALGEASSDDDLFQSAKPKPAKKTNPFPLLED
EDDLFTDQKVKKNETKSNSQQDVILTTQDIFEDDIFATEAIKPSQKTREKEKTLESNL
FDDNIDIFADLTVKPKEKSKKKVEAKSIFDDDMDDIFSSGIQAKTTKPKSRSAQAAPE
PRFEHKVSNIFDDPLNAFGGQ"
BASE COUNT 1319 a 958 c 1095 g 924 t
ORIGIN
1 ggcgtgtgct ggcagcttcg gagcccaccg agccgggcgg ctaggatgat gaaccggacg
61 acccccgacc aggagctggc gccagcgtcg gagcccgtgt gggagcggcc gtggtcggtg
121 gaggagatcc gcaggagcag ccagagctgg tcgctggcgg ccgacgcggg cctactacag
181 tttctacagg aattctcaca gcaaactatc tctaggaccc atgaaatcaa gaaacaagtg
241 gacggactaa ttcgggaaac caaagccaca gattgtcgcc tgcataatgt cttcaatgac
301 ttccttatgc tctctaatac ccagttcatt gagaatcgtg tatatgatga agaagtggag
361 gagccagtac tcaaggctga ggcagaaaaa acagagcagg agaagacacg agagcagaaa
421 gaagtagatc tcattcctaa agtccaggag gctgtgaact atggcttaca agtattggac
481 agtgcctttg agcaacttga tatcaaagca ggaaactcag actccgagga agatgatgct
541 aatgggcggg tggaactgat ccttgaacca aaggatctat acattgatcg tcctttacca
601 tatctcattg ggtcaaagct gttcatggaa caagaagatg taggtcttgg agagctgtcc
661 agtgaagaag gctctgtagg cagtgatcgt ggcagtattg tggacactga ggaagagaaa
721 gaagaggagg agtcagatga agattttgcc catcatagtg acaatgaaca aaaccggcac
781 accacacaaa tgagtgatga ggaagaggat gatgatggct gtgacctttt cgctgactct
841 gagaaggagg aggaagatat tgaggacatt gaagaaaata ctagacctaa aagaagcaga
901 cctacatcgt ttgcagatga gctggctgcc cgcatcaagg gggatgccgt gggtcgagtg
961 gacgaggagc cgacaacctt accctcagga gaagcaaaac ctcggaagac actcaaagag
1021 aagaaggaaa ggagaactcc ttcagacgat gaagaggata acttattcgc accccccaag
1081 ctgaccgacg aggacttctc gccatttggc tctggaggtg gcctgttcag tgggggcaag
1141 gggctctttg atgatgagga cgaggagagt gacctcttca cggaagcccc ccaggatcgg
1201 caagctggag cctctgttaa ggaggagtct tcatcatcca aacctggaaa gaaaatccca
1261 gcaggagctg tttctgtatt tttaggagac acggatgtgt ttggtgctgc ctccgttcca
1321 tcaatgaagg agccacagaa gcctgagcag cccactccaa ggaaaagccc ctatggtccc
1381 cctcccactg gcctctttga tgatgatgat ggtgatgatg atgacgactt tttctcggca
1441 ccccacagca aaccttctaa aacaggcaaa gtccaatcca ctgccgatat ctttggtgac
1501 gaagaaggag atctgttcaa agaaaaagcc gtagcatcgc cagaagccac tgtgagtcag
1561 acagatgaaa ataaagcaag agcagaaaaa aaggttacct tatcttccag caaaaatctc
1621 aagccctcat cagaaacaaa gactcaaaaa ggcttatttt cagatgagga ggactctgag
1681 gatttgtttt cttctcaaag tgcgagtaag ttaaaaggtg cgtctctgct gcctggcaag
1741 ctccccacgt tggtttccct gtttgatgat gaagatgaag aggataatct ttttgggggt
1801 acagctgcta agaagcagac attgtgtcta caagctcaga gagaagagaa agcaaaagcc
1861 tccgagctct ccaaaaagaa agcatctgcc ctgttgttca gcagtgatga ggaggaccag
1921 tggaatattc ctgcttcaca gacccactta gcatctgaca gcaggtctaa aggagaaccc
1981 agggattctg ggaccctcca gagccaggag gccaaggctg tgaaaaagac cagtctcttt
2041 gaggaagacg aagaagatga tctttttgcc attgccaagg acagccaaaa gaagacccag
2101 agagtgtcac tcctctttga agacgatgtt gatagcggag gctctctgtt tggctctcct
2161 cccacatctg ttcctcctgc aacaaagaaa aaagagactg tctctgaggc accacctttg
2221 ctgttcagcg atgaagaaga gaaggaggca caacttggag tgaagtctgt ggataagaag
2281 gttgagagtg ccaaggagtc attaaaattt gggagaactg atgtggctga gtcagaaaag
2341 gaaggacttt tgactagatc tgctcaggaa acagtcaagc attctgattt attttcttca
2401 tcatccccat gggacaaagg aaccaagcct agaaccaaaa ctgttcttag cttgtttgat
2461 gaggaagagg ataaaatgga agatcaaaac attatccagg ctccacagaa agaagtagga
2521 aagggccgcg atcctgatgc ccaccccaag agcacaggtg tcttccagga tgaagagctg
2581 cttttcagcc acaagctcca aaaggacaat gacccagatg ttgacctttt tgctggcacc
2641 aaaaaaacca agctgttaga gccaagtgtt gggagcctgt ttggggatga tgaagatgat
2701 gatcttttca gctctgccaa gtcccagcct ttggtacaag agaaaaagag agtagtgaaa
2761 aaagaccact ctgttgactc tttcaaaaac cagaaacatc ctgaatccat tcaaggtagt
2821 aaagaaaaag gcatatggaa gccggaaaca cctcaggact catcaggtct cgctccattt
2881 aaaaccaaag aaccatccac tcggatcggg aagatacaag caaatttagc gatcaaccca
2941 gcggccttgc tgcccacagc ggcttcccag atctctgaag taaagcctgt tttgccagaa
3001 ttggcttttc cttcatctga acacagaagg agctacggtc tggaaagtgt gcctgtcctt
3061 cccgggagtg gggaggccgg tgtgagtttt gatcttccag ctcaggcaga caccttacac
3121 agtgcaaaca agagccgtgt caagatgaga gggaagcgta gaccgcagac ccgtgcagct
3181 aggcggctgg ctgctcagga gtccagcgag actgaggaca tgagcgtccc cagaggaccc
3241 attgcacagt gggctgatgg cgccatttcc ccaaatggcc atcggccaca gctcagagca
3301 gccagtggag aagacagcac tgaggaggcc ctggcagctg ccgctgcacc ttgggaaggt
3361 ggtcctgtgc ctggagtgga cagaagcccc tttgcaaagt ctctgggtca ttccagaggg
3421 gaggctgacc tttttgattc tggggacatc ttttccacgg gcactggatc tcagtctgtg
3481 gagagaacaa aacccaaggc aaagatagca gagaatcctg ccaacccacc agtgggtggt
3541 aaagcaaaga gccccatgtt tcctgctcta ggtgaggcca gcagtgatga tgatctcttt
3601 cagtctgcta aaccaaaacc agcaaagaaa acaaatccct ttcctctcct ggaagatgag
3661 gatgacctct ttacagatca gaaagtcaag aagaatgaga caaaatccaa tagtcagcag
3721 gatgtcatat taacaacaca agatattttt gaggatgata tatttgctac ggaagcaatt
3781 aaaccctctc agaaaaccag agagaaggag aaaacattgg aatctaattt atttgatgat
3841 aacattgata tctttgctga cttaactgta aaaccaaaag aaaagtccaa aaagaaagtg
3901 gaagccaagt ctatatttga tgatgatatg gatgacatct tctcctctgg tatccaggct
3961 aagacaacca aaccaaaaag ccgatctgca caggccgcac ctgaaccaag atttgaacac
4021 aaggtgtcca acatctttga tgatcccctg aatgcctttg gaggccagta gagcacacag
4081 ggtatccaca tgttaccctg cagctacatt gttgagttag tgatgatgtt gtatatgctg
4141 atggtcttaa ctggattaca aaaagcaaat actagaacag ctagctcatc gttcacccaa
4201 tgtacttggt atttttctgc actggtttaa tcatgcttaa tactacaaaa caaaaataaa
4261 tatttcacag tgaaaaaaaa aaaaaaaaaa aaaaaa
//