LOCUS BC082241 3841 bp mRNA linear HUM 25-AUG-2005
DEFINITION Homo sapiens ubiquitin specific peptidase 19, mRNA (cDNA clone
IMAGE:4841019), partial cds.
ACCESSION BC082241
VERSION BC082241.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3841)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3841)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: d Column: 11.
FEATURES Location/Qualifiers
source 1..3841
/db_xref="H-InvDB:HIT000265958"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4841019"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3841
/gene="USP19"
/gene_synonym="ZMYND9"
/db_xref="GeneID:10869"
CDS <1..3541
/gene="USP19"
/gene_synonym="ZMYND9"
/codon_start=2
/product="USP19 protein"
/protein_id="AAH82241.1"
/db_xref="GeneID:10869"
/translation="STPQEEQTKEELLLDWRQSAEEVIVKLRVGVGPLQLEDVDAAFT
DTDCVVRFAGGQQWGGVFYAEIKSSCAKVQTRKGSLLHLTLPKKVPMLTWPSLLVEAD
EQLCIPPLNSQTCLLGSEENLAPLAGEKAVPPGNDPVSPAMVRSRNPGKDDCAKEEMA
VAADAATLVDEPESMVNLAFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTL
IFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCTFCFTASRIDICLRKRQSQRW
GGLEAPAARGAVGGAKVAVPTGPTPLDSTPPGGAPHPLTGQEEARAVEKDKSKARSED
TGLDSVATRTPMEHVTPKPETHLASPKPTCMVPPMPHSPVSGDSVEEEEEEEKKVCLP
GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAV
LLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNK
PYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDP
FLYLPVPLPQKQKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVKPE
NLRLAEVIKNRFHRVFLPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQQRPQVP
SVPISKCAACQRKQQSEDEKLKRCTRCYRVGYCNQLCQKTHWPDHKGLCRPENIGYPF
LVSVPASRLTYARLAQLLEGYARYSVSVFQPPFQPGRMALESQSPGCTTLLSTGSLEA
GDSERDPIQPPELQLVTPMAEGDTGLPRVWAAPDRGPVPSTSGISSEMLASGPIEVGS
LPAGERVSRPEAAVPGYQHPSEAMNAHTPQFFIYKIDSSNREQRLEDKGDTPLELGDD
CSLALVWRNNERLQEFVLVASKELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLA
PEEAWYCPQCKQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNL
DLSKFCIGQKEEQLPSYDLYAVINHYGGMIGGHYTACARLPNDRSSQRSDVGWRLFDD
STVTTVDESQVVTRYAYVLFYRRRNSPVERPPRAGHSEHHPDLGPAAEAAASQGLGPG
QAPEVAPTRTAPERFAPTVDRPAPTYSNMEEVD"
BASE COUNT 823 a 1095 c 1110 g 813 t
ORIGIN
1 atccactcct caagaggagc agaccaaaga ggagttgttg ctcgattgga ggcagagtgc
61 agaagaggtg attgtcaagc ttcgtgtggg agtaggtccc ctgcagctgg aggatgtaga
121 tgctgctttc acagatacag actgtgtggt gcggtttgca ggtggtcagc agtggggtgg
181 tgtcttctat gctgagataa aaagctcttg tgctaaagtg caaacccgca agggcagtct
241 cctgcacctg acactgccca aaaaggtgcc tatgctcacg tggccctccc tcctggttga
301 ggctgatgaa cagctttgca taccaccgct gaactcccaa acctgcctcc tgggctcaga
361 ggagaattta gcccctttgg caggagagaa agcagtgcct cccgggaatg acccagtctc
421 tccagccatg gtccggagca gaaaccctgg gaaagatgac tgtgccaagg aggagatggc
481 agtggcagca gacgctgcaa ccttggtgga tgagcccgag tcgatggtga acctggcgtt
541 tgtcaagaat gactcgtatg agaagggccc ggattcagtg gtggtgcacg tgtacgtgaa
601 ggagatctgc agggacacct caagagtact tttccgtgag caggacttca cgctcatctt
661 ccagaccagg gatggaaact tcctgaggct gcacccgggc tgtgggcccc acaccacctt
721 ccgttggcag gtgaagctca ggaatctgat tgagccagag cagtgcacct tctgtttcac
781 ggcttctcgc atcgacatct gccttcgtaa gaggcagagt cagcgctggg ggggcctgga
841 ggccccggct gcacgaggtg cagtgggtgg tgcaaaggtt gccgtgccga caggtccaac
901 ccctctggat tcaaccccac caggaggtgc tccccacccc ctgacaggcc aggaggaggc
961 ccgggctgtg gagaaggata aatccaaggc acgatctgag gacacagggc tagacagtgt
1021 ggcaacccgc acacccatgg agcatgtaac cccaaagcca gagacacacc tggcctcgcc
1081 caagcctaca tgcatggtgc ctcccatgcc ccacagccca gttagtggag acagcgtgga
1141 ggaggaggaa gaggaagaga agaaggtgtg tctgccaggc ttcactggcc ttgtcaattt
1201 aggcaacacc tgcttcatga acagcgtcat tcagtctctg tccaacactc gggaactccg
1261 ggacttcttc catgaccgct cctttgaggc tgagatcaac tacaacaacc cactagggac
1321 tggtgggcgt ctggccattg gctttgccgt gctgcttcgg gcgctgtgga agggcaccca
1381 ccatgccttc cagccttcca agttgaaggc cattgtggcg agtaaggcca gccagttcac
1441 aggctatgca cagcatgatg cccaggagtt catggctttc ctgctggatg ggctgcacga
1501 ggacctgaat cgcattcaga acaagcccta cacagagacc gtggattcag atgggcggcc
1561 cgatgaggtg gtagctgagg aagcatggca gcggcacaag atgaggaatg actctttcat
1621 cgtggaccta tttcaggggc agtacaagtc gaagctggtg tgccctgtgt gtgccaaggt
1681 ctccatcact tttgacccgt ttctttatct gccggtgccc ttgccacaaa agcaaaaggt
1741 tctccctgtc ttttattttg cccgagagcc ccacagcaag cccatcaagt tcctggtgag
1801 cgtcagcaag gagaactcca ctgcgagcga agtattggac tccctctctc agagtgttca
1861 tgtgaagcct gagaacctgc gtttggcgga ggtaattaag aatcgttttc atcgtgtgtt
1921 cctaccctcc cactcactgg acactgtgtc cccatctgat acgctcctct gctttgagct
1981 gctatcctca gagttggcta aggagcgggt agtggtgcta gaggtgcaac agcgccccca
2041 ggtgcccagc gtccccatct ccaagtgtgc agcctgccag cggaagcaac agtcggagga
2101 tgaaaagctg aagcgctgta cccggtgcta ccgtgtgggc tactgcaacc agctctgcca
2161 gaaaacccac tggcctgacc acaagggcct ctgccgacct gagaacattg gctacccctt
2221 cctggtcagt gtacctgcct cacgcctcac ttatgcccgc ctcgctcagt tgctagaggg
2281 ctatgcccgg tactctgtga gtgtattcca gccacccttt cagccaggcc gcatggcctt
2341 ggagtctcag agccctggct gcaccacact gctctccaca ggttccctgg aggctgggga
2401 cagcgagaga gaccccattc agccacctga gctccagctg gtgaccccta tggctgaggg
2461 ggacacaggg cttccccggg tgtgggcagc ccctgaccgg ggtcctgtgc ccagcaccag
2521 tggaatttct tctgagatgc tggccagtgg gcccattgag gttggctcct tgccagctgg
2581 cgagagggtg tcccgacccg aagctgctgt gcctgggtac cagcatccaa gtgaagctat
2641 gaatgcccac acaccccagt tcttcatcta taaaattgat tcatccaacc gagagcagcg
2701 gctagaggac aaaggagaca ccccactgga gctgggtgac gactgtagcc tggctctcgt
2761 ctggcggaac aatgagcgct tgcaggagtt tgtgttggta gcctccaagg agctggaatg
2821 tgctgaggat ccaggctctg ccggtgaggc tgcccgggcc ggccacttca ccctggacca
2881 gtgcctcaac ctcttcacac ggcctgaggt gctggcaccc gaggaggcct ggtactgccc
2941 acagtgcaaa cagcaccgtg aggcctccaa gcagctgttg ctatggcgcc tgccaaatgt
3001 tctcatcgtg cagctcaagc gcttctcctt tcgtagtttt atctggcgtg acaagatcaa
3061 tgacttggtg gagttccctg ttaggaacct ggacctgagc aagttctgca ttggtcagaa
3121 agaggagcag ctgcccagct acgatctata tgctgtcatc aaccactatg gaggcatgat
3181 tggtggccac tacactgcct gtgcacgcct gcccaatgat cgtagcagtc agcgcagtga
3241 cgtgggctgg cgcttgtttg atgacagcac agtgacaacg gtagacgaga gccaggttgt
3301 gacgcgttat gcctatgtac tcttctaccg ccggcggaac tctcctgtgg agaggccccc
3361 cagggcaggt cactctgagc accacccaga cctaggccct gcagctgagg ctgctgccag
3421 ccagggacta ggccctggcc aggcccccga ggtggccccc acgcggacag cccctgaacg
3481 cttcgccccc actgtggatc ggccagcccc cacctacagc aacatggagg aggtggatta
3541 gcaggtccct ggctgatggg ggggactggg tttgggacac ccacacagag ggccagctcc
3601 ttgccgcttc tccttctcta acccagagga cactggctct gtcagtggga agctgagggg
3661 tatgatttgg gtgtggagac ctctcaggtt gggacttctt gtcagcttgg acccctgacc
3721 agtgggcttt ggcttctcca gccgcctcca gtgctgcgtg atttgattct gttgtacctt
3781 caattcttct gacccgcatt ataaacatta taattttatt ctaaaaaaaa aaaaaaaaaa
3841 a
//