LOCUS BC082228 990 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens stathmin 1/oncoprotein 18, mRNA (cDNA clone MGC:99593
IMAGE:2822803), complete cds.
ACCESSION BC082228
VERSION BC082228.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 990)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 990)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: a Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 44890049.
FEATURES Location/Qualifiers
source 1..990
/db_xref="H-InvDB:HIT000265946"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:99593 IMAGE:2822803"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..990
/gene="STMN1"
/gene_synonym="Lag"
/gene_synonym="OP18"
/gene_synonym="PP17"
/gene_synonym="PP19"
/gene_synonym="PR22"
/gene_synonym="SMN"
/db_xref="GeneID:3925"
/db_xref="HGNC:HGNC:6510"
/db_xref="MIM:151442"
CDS 75..524
/gene="STMN1"
/gene_synonym="Lag"
/gene_synonym="OP18"
/gene_synonym="PP17"
/gene_synonym="PP19"
/gene_synonym="PR22"
/gene_synonym="SMN"
/codon_start=1
/product="stathmin 1/oncoprotein 18"
/protein_id="AAH82228.1"
/db_xref="GeneID:3925"
/db_xref="HGNC:HGNC:6510"
/db_xref="MIM:151442"
/translation="MASSDIQVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKD
LSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLT
HKMEANKENREAQMAAKLERLREKDKHIEEVRKNKESKDPADETEAD"
BASE COUNT 311 a 195 c 216 g 268 t
ORIGIN
1 cggactgagc aggactttcc ttatcccagt tgattgtgca gaatacactg cctgtcgctt
61 gtcttctatt caccatggct tcttctgata tccaggtgaa agaactggag aagcgtgcct
121 caggccaggc ttttgagctg attctcagcc ctcggtcaaa agaatctgtt ccagaattcc
181 ccctttcccc tccaaagaag aaggatcttt ccctggagga aattcagaag aaattagaag
241 ctgcagaaga aagacgcaag tcccatgaag ctgaggtctt gaagcagctg gctgagaaac
301 gagagcacga gaaagaagtg cttcagaagg caatagaaga gaacaacaac ttcagtaaaa
361 tggcagaaga gaaactgacc cacaaaatgg aagctaataa agagaaccga gaggcacaaa
421 tggctgccaa actggaacgt ttgcgagaga aggataagca cattgaagaa gtgcggaaga
481 acaaagaatc caaagaccct gctgacgaga ctgaagctga ctaatttgtt ctgagaactg
541 actttctccc catccccttc ctaaatatcc aaagactgta ctggccagtg tcattttatt
601 ttttccctcc tgacaaatat tttagaagct aatgtaggac tgtataggta gatccagatc
661 cagactgtaa gatgttgttt taggggctaa aggggagaaa ctgaaagtgt tttactcttt
721 ttctaaagtg ttggtctttc taatgtagct atttttcttg ttgcatcttt tctacttcag
781 tacacttggt gtactgggtt aatggctagt actgtattgg ctctgtgaaa acatatttgt
841 gaaaagagta tgtagtggct tcttttgaac tgttagatgc tgaatatctg ttcacttttc
901 aatcccaatt ctgtcccaat cttaccagat gctactggac ttgaatggtt aataaaactg
961 cacagtgcta aaaaaaaaaa aaaaaaaaaa
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