LOCUS BC081541 3805 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens poly (ADP-ribose) polymerase family, member 12, mRNA
(cDNA clone MGC:71625 IMAGE:5296560), complete cds.
ACCESSION BC081541
VERSION BC081541.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3805)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3805)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-SEP-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: o Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52345407.
FEATURES Location/Qualifiers
source 1..3805
/db_xref="H-InvDB:HIT000265930"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71625 IMAGE:5296560"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3805
/gene="PARP12"
/gene_synonym="FLJ22693"
/gene_synonym="PARP-12"
/gene_synonym="ZC3H1"
/db_xref="GeneID:64761"
/db_xref="HGNC:HGNC:21919"
CDS 875..2980
/gene="PARP12"
/gene_synonym="FLJ22693"
/gene_synonym="PARP-12"
/gene_synonym="ZC3H1"
/codon_start=1
/product="poly (ADP-ribose) polymerase family, member 12"
/protein_id="AAH81541.1"
/db_xref="GeneID:64761"
/db_xref="HGNC:HGNC:21919"
/translation="MAQAGVVGEVTQVLCAAGGALELPELRRRLRMGLSADALERLLR
QRGRFVVAVRAGGAAAAPERVVLAASPLRLCRAHQGSKPGCVGLCAQLHLCRFMVYGA
CKFLRAGKNCRNSHSLTTEHNLSVLRTHGVDHLSYNELCQLLFQNDPWLLPEICQHYN
KGDGPHGSCAFQKQCIKLHICQYFLQGECKFGTSCKRSHDFSNSENLEKLEKLGMSSD
LVSRLPTIYRNAHDIKNKSSAPSRVPPLFVPQGTSERKDSSGSVSPNTLSQEEGDQIC
LYHIRKSCSFQDKCHRVHFHLPYRWQFLDRGKWEDLDNMELIEEAYCNPKIERILCSE
SASTFHSHCLNFNAMTYGATQARRLSTASSVTKPPHFILTTDWIWYWSDEFGSWQEYG
RQGTVHPVTTVSSSDVEKAYLAYCTPGSDGQAATLKFQAGKHNYELDFKAFVQKNLVY
GTTKKVCRRPKYVSPQDVTTMQTCNTKFPGPKSIPDYWDSSALPDPGFQKITLSSSSE
EYQKVWNLFNRTLPFYFVQKIERVQNLALWEVYQWQKGQMQKQNGGKAVDERQLFHGT
SAIFVDAICQQNFDWRVCGVHGTSYGKGSYFARDAAYSHHYSKSDTQTHTMFLARVLV
GEFVRGNASFVRPPAKEGWSNAFYDSCVNSVSDPSIFVIFEKHQVYPEYVIQYTTSSK
PSVTPSILLALGSLFSSRQ"
BASE COUNT 813 a 1040 c 1023 g 929 t
ORIGIN
1 attcctggat tacctcctca aagggctcta acaactcgca ttgctctcag cgtgtgagag
61 ggtcctttgc tctgaagggt cttctaaaat atttgttcaa tcgttactta gcaggggctg
121 ggagtaacgg attttatttt attttatttt attttttgag acggagtctc gctctgtcgc
181 ccaggctgga gtgcagtcgc gcaatctcgg ctcacggatt tgctctttta aaggacatac
241 ccttttatgt ttaaatgaag gaactcattg atgcaccgag gcgaaaggaa cctttaatta
301 agtgcgtctt ctatgcggag tgatcgcttt tgtcacttgt tcgaggggtg agagctcccg
361 tcagttgtcc ctgtttctgt gagccgtcta cgaagcccgg gcttggcctg ggcgacgctg
421 agcggcttta accggcggcg tccagccggc tccgccagcg ctgccgccgc cctcgaggct
481 ccctctgact gaaggcgcgc tgagcatcgc ggcattaggg gctcctggtc cctcaaacat
541 ccagggaagc cattttcagg gactaggtac tgacccccgc gagccgccac agccacagcc
601 cgcgctccgg gccgaacgcc cgagctcaag agctcccgag cttccgtcgg gcggcggcct
661 cacagctggg ggccctgagg cggaaggcgc agccgctcag ctgcggaccg ggggcgtggc
721 gagggcgcac aggttctgtt tttcgccggc ccggggccgc tttcggtttc gtttcccgcc
781 ggcgtctcca ccctgcgaga gccgcccgcc agccagcgtc cgccgccgtc cgcgtcgcgc
841 cacccgcggt ccgacgggag caggcccagc ggccatggcc caggccggcg tcgtcggtga
901 ggtcacccag gtgctgtgcg cggccggggg cgccctggag ttgcccgagc tgcggcgccg
961 cttgcggatg ggcttgagcg ccgacgcgct ggagcggctg ctgcggcagc gtgggcgctt
1021 cgtggtggcg gtgcgggcgg gcggcgcagc cgcggccccg gagcgcgtgg tgctggccgc
1081 ctcgccgctg cgcctgtgtc gcgcgcacca gggctccaag ccgggctgcg tggggctctg
1141 cgcgcagctc cacctctgca ggttcatggt ctacggcgcc tgcaagttcc tgagagccgg
1201 gaagaactgt aggaatagtc acagcttgac aaccgaacac aacctgagtg tgctgagaac
1261 tcatggcgtt gaccacctga gctataatga gctatgccaa ctcttgtttc agaacgaccc
1321 ctggcttttg ccagaaattt gccaacatta caacaaagga gatggacccc acggctcttg
1381 tgcctttcaa aagcagtgca tcaagctcca tatctgccag tattttttac agggggaatg
1441 caagtttggc actagctgta agagatccca tgatttctct aattctgaga atctggaaaa
1501 attggagaag ttgggtatga gctcagacct ggtgagcagg ctgcctacca tttatagaaa
1561 tgcacatgac atcaagaata agagctctgc ccccagcaga gtgcctcctc tttttgtccc
1621 acaggggact tctgaaagaa aagacagttc aggttctgtg tccccaaaca ctcttagcca
1681 ggaggagggt gatcagatct gtttgtacca tatccggaaa agttgtagct ttcaagataa
1741 gtgccataga gttcatttcc atttgccgta tcgatggcaa ttcttggata gaggcaaatg
1801 ggaggatttg gacaacatgg aacttattga agaggcatat tgcaatccca aaatagaaag
1861 gatcctgtgc tctgagtcag ccagtacctt tcactctcat tgtctgaact ttaacgccat
1921 gacttacggt gctacccagg ctcgccgcct ctccacggcc tcctctgtca ccaaacctcc
1981 acacttcatc ctcaccactg actggatttg gtactggagt gatgagtttg gttcttggca
2041 ggaatatgga agacagggca cggtgcaccc tgtgaccact gtcagcagta gcgacgtgga
2101 gaaggcctac ctggcctact gtacaccggg gtctgacggc caggcagcca ccttgaagtt
2161 ccaggccgga aagcacaact acgagttaga tttcaaagcc ttcgttcaga aaaacctggt
2221 ctatggcaca actaaaaagg tttgccgcag acccaaatac gtgtctcccc aggatgtgac
2281 gaccatgcaa acctgcaata ccaagtttcc aggcccgaag agcatcccag actattggga
2341 ctcctctgcc ctgccagacc caggctttca gaagatcacc cttagttctt cctcggaaga
2401 gtatcagaag gtctggaacc tctttaaccg cacgctgcct ttctactttg ttcagaagat
2461 tgagcgagta cagaacctgg ccctctggga agtctaccag tggcaaaaag gacagatgca
2521 gaagcagaat ggagggaagg ccgtggacga gcggcagctg ttccacggca ccagcgccat
2581 ttttgtggac gccatctgcc agcagaactt tgactggcgg gtctgtggtg ttcatggcac
2641 ttcctacggc aaggggagct actttgcccg agatgctgca tattcccacc actacagcaa
2701 atccgacacg cagacccaca cgatgttcct ggcccgggtg ctggtgggcg agttcgtcag
2761 gggcaatgcg tcctttgtcc gtccgccggc caaggagggc tggagcaacg ccttctatga
2821 tagctgcgtg aacagtgtgt ccgacccctc catctttgtg atctttgaga aacaccaggt
2881 ctacccagag tatgtcatcc agtacaccac ctcctccaag ccctcggtca caccctccat
2941 cctgctggcc ttgggctccc tgttcagcag ccgacagtga gcgcacagga gtgttccagg
3001 cctttcacct gctctgcctt gaaatggcta tttgggcctt tccttttctt tttaaacaga
3061 aacttttaat gaactgttct cttaacattg acctctcaat gaagttatgt tcttaatctc
3121 ttgctaataa tgatttttac ttttaagtca cttttgggtt cactagtgga ttaaccagaa
3181 gtgattgtag ttgagtccag ttttgctttt taataatgtg ttgaagtttt agtttttact
3241 ctttgttgac tttgctgctt attggcacca gggacagagt ttctagatac aattttatgg
3301 attggtttta atttttatga gtttgtctct gcagtgattc ggtttctcag agtctcatgg
3361 catcatagtt tttccagaat gacacagtag ccaccggtgg atgacagccc acgggcggca
3421 cagtcacttc tgcctgttgt tctgacacca acccaggcag ctctgctgtg gcttctcctg
3481 ggctctggca ttagttggtc tgtgtcacat tgtcagaaca ggtggctgct gtgtggtgcc
3541 atcgagtccc tgctggttcc ccttgtcctg ggagggtcac ccattgccca aggaagtgca
3601 tccacctggc aggtgacctg gaggagtagc ttccccgagg acccccaggc ttggcctgtg
3661 attgcgcaaa cccacatttc ctaagcacac tggacaccct tcgagtgtgg gttttaacat
3721 ccctgtgaga ttgaatactt gtgccacaca tgtcacaaaa gagtatggaa ataaaagaaa
3781 atttatccga aaaaaaaaaa aaaaa
//