LOCUS BC080647 2622 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens scavenger receptor class B, member 1, mRNA (cDNA clone MGC:99530 IMAGE:6576008), complete cds. ACCESSION BC080647 VERSION BC080647.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2622) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2622) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-AUG-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 59 Row: n Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 33620766. FEATURES Location/Qualifiers source 1..2622 /db_xref="H-InvDB:HIT000265909" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:99530 IMAGE:6576008" /tissue_type="Prostate, carcinoma" /clone_lib="NIH_MGC_40" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2622 /gene="SCARB1" /gene_synonym="CLA-1" /gene_synonym="CLA1" /gene_synonym="SR-BI" /gene_synonym="SRB1" /db_xref="GeneID:949" /db_xref="HGNC:HGNC:1664" /db_xref="MIM:601040" CDS 128..1657 /gene="SCARB1" /gene_synonym="CLA-1" /gene_synonym="CLA1" /gene_synonym="SR-BI" /gene_synonym="SRB1" /codon_start=1 /product="scavenger receptor class B, member 1" /protein_id="AAH80647.1" /db_xref="GeneID:949" /db_xref="HGNC:HGNC:1664" /db_xref="MIM:601040" /translation="MGCSAKARWAAGALGVAGLLCAVLGAVMIVMVPSLIKQQVLKNV RIDPSSLSFNMWKEIPIPFYLSVYFFDVMNPSEILKGEKPQVRERGPYVYREFRHKSN ITFNNNDTVSFLEYRTFQFQPSKSHGSESDYIVMPNILVLGAAVMMENKPMTLKLIMT LAFTTLGERAFMNRTVGEIMWGYKDPLVNLINKYFPGMFPFKDKFGLFAELNNSDSGL FTVFTGVQNISRIHLVDKWNGLSKVDFWHSDQCNMINGTSGQMWPPFMTPESSLEFYS PEACRSMKLMYKESGVFEGIPTYRFVAPKTLFANGSIYPPNEGFCPCLESGIQNVSTC RFSAPLFLSHPHFLNADPVLAEAVTGLHPNQEAHSLFLDIHPVTGIPMNCSVKLQLSL YMKSVAGIGQTGKIEPVVLPLLWFAESGAMEGETLHTFYTQLVLMPKVMHYAQYVLLA LGCVLLLVPVICQIRSQEKCYLFWSSSKKGSKDKEAIQAYSESLMTSAPKGSVLQEAK L" BASE COUNT 527 a 839 c 711 g 545 t ORIGIN 1 cccggatcca ccgtgcctct gcggcctgcg tgcccggagt ccccgcctgt gtcgtctctg 61 tcgccgtccc cgtctcctgc caggcgcgga gccctgcgag ccgcgggtgg gccccaggcg 121 cgcagacatg ggctgctccg ccaaagcgcg ctgggctgcc ggggcgctgg gcgtcgcggg 181 gctactgtgc gctgtgctgg gcgctgtcat gatcgtgatg gtgccgtcgc tcatcaagca 241 gcaggtcctt aagaacgtgc gcatcgaccc cagtagcctg tccttcaaca tgtggaagga 301 gatccctatc cccttctatc tctccgtcta cttctttgac gtcatgaacc ccagcgagat 361 cctgaagggc gagaagccgc aggtgcggga gcgcgggccc tacgtgtaca gggagttcag 421 gcacaaaagc aacatcacct tcaacaacaa cgacaccgtg tccttcctcg agtaccgcac 481 cttccagttc cagccctcca agtcccacgg ctcggagagc gactacatcg tcatgcccaa 541 catcctggtc ttgggtgcgg cggtgatgat ggagaataag cccatgaccc tgaagctcat 601 catgaccttg gcattcacca ccctcggcga acgtgccttc atgaaccgca ctgtgggtga 661 gatcatgtgg ggctacaagg acccccttgt gaatctcatc aacaagtact ttccaggcat 721 gttccccttc aaggacaagt tcggattatt tgctgagctc aacaactccg actctgggct 781 cttcacggtg ttcacggggg tccagaacat cagcaggatc cacctcgtgg acaagtggaa 841 cgggctgagc aaggttgact tctggcattc cgatcagtgc aacatgatca atggaacttc 901 tgggcaaatg tggccgccct tcatgactcc tgagtcctcg ctggagttct acagcccgga 961 ggcctgccga tccatgaagc taatgtacaa ggagtcaggg gtgtttgaag gcatccccac 1021 ctatcgcttc gtggctccca aaaccctgtt tgccaacggg tccatctacc cacccaacga 1081 aggcttctgc ccgtgcctgg agtctggaat tcagaacgtc agcacctgca ggttcagtgc 1141 ccccttgttt ctctcccatc ctcacttcct caacgccgac ccggttctgg cagaagcggt 1201 gactggcctg caccctaacc aggaggcaca ctccttgttc ctggacatcc acccggtcac 1261 gggaatcccc atgaactgct ctgtgaaact gcagctgagc ctctacatga aatctgtcgc 1321 aggcattgga caaactggga agattgagcc tgtggtcctg ccgctgctct ggtttgcaga 1381 gagcggggcc atggaggggg agactcttca cacattctac actcagctgg tgttgatgcc 1441 caaggtgatg cactatgccc agtacgtcct cctggcgctg ggctgcgtcc tgctgctggt 1501 ccctgtcatc tgccaaatcc ggagccaaga gaaatgctat ttattttgga gtagtagtaa 1561 aaagggctca aaggataagg aggccattca ggcctattct gaatccctga tgacatcagc 1621 tcccaagggc tctgtgctgc aggaagcaaa actgtagggt cctgaggaca ccgtgagcca 1681 gccaggcctg gccgctgggc ctgaccggcc ccccagcccc tacaccccgc ttctcccgga 1741 ctctcccagc ggacagcccc ccagccccac agcctgagcc tcccagctgc catgtgcctg 1801 ttgcacacct gcacacacgc cctggcacac atacacacat gcgtgcaggc ttgtgcagac 1861 actcagggat ggagctgctg ctgaagggac ttgtagggag aggctcgtca acaagcactg 1921 ttctggaacc ttctctccac gtggcccaca ggcctgacca caggggctgt gggtcctgcg 1981 tccccttcct cgggtgagcc tggcctgtcc cgttcagccg ttgggcccag gcttcctccc 2041 ctccaaggtg aaacactgca gtcccggtgt ggtggctccc catgcaggac gggccaggct 2101 gggagtgccg ccttcctgtg ccaaattcag tggggactca gtgcccaggc cctggccacg 2161 agctttggcc ttggtctacc tgccaggcca ggcaaagcgc ctttacacag gcctcggaaa 2221 acaatggagt gagcacaaga tgccctgtgc agctgcccga gggtctccgc ccaccccggc 2281 cggactttga tccccccgaa gtcttcacag gcactgcatc gggttgtctg gcgccctttt 2341 cctccagcct aaactgacat catcctatgg actgagccgg ccactctctg gccgaagtgg 2401 ccgcaggctg tgcccccgag ctgcccccac cccctcacag ggtccctcag attataggtg 2461 cccaggctga ggtgaagagg cctgggggcc ctgccttccg ggcgctcctg gaccctgggg 2521 caaacctgtg acccttttct actggaatag aaatgagttt tatcatcttt gaaaaataat 2581 tcactcttga agtaataaac gtttaaaaaa aaaaaaaaaa aa //