LOCUS BC080641 2842 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens sterile alpha motif domain containing 4B, mRNA (cDNA
clone MGC:99832 IMAGE:6645022), complete cds.
ACCESSION BC080641
VERSION BC080641.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2842)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2842)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: o Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55742694.
FEATURES Location/Qualifiers
source 1..2842
/db_xref="H-InvDB:HIT000265904"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:99832 IMAGE:6645022"
/tissue_type="Ovary, teratocarcinoma"
/clone_lib="NIH_MGC_109"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2842
/gene="SAMD4B"
/gene_synonym="FLJ10211"
/gene_synonym="MGC99832"
/gene_synonym="SMGB"
/db_xref="GeneID:55095"
/db_xref="HGNC:HGNC:25492"
CDS 284..2278
/gene="SAMD4B"
/gene_synonym="FLJ10211"
/gene_synonym="MGC99832"
/gene_synonym="SMGB"
/codon_start=1
/product="SAMD4B protein"
/protein_id="AAH80641.1"
/db_xref="GeneID:55095"
/db_xref="HGNC:HGNC:25492"
/translation="MMFRDQVGILAGWFKGWNECEQTVALLSLLKRVTRTQARFLQLC
LEHSLADCNDIHLLESEANSAAIVSQWQQESKEKVVSLLLSHLPLLQPGNTEAKSEYM
RLLQKVLAYSIESNAFIEESRQLLSYALIHPATTLEDRNALALWLSHLEERLASGFRS
RPEPSYHSRQGSDEWGGPAELGPGEAGPGWQDKPPRENGHVPFHPSSSVPPAINSIGS
NANTGLPCQIHPSPLKRSMSLIPTSPQVPGEWPSPEELGARAAFTTPDHAPLSPQSSV
ASSGSEQTEEQGSSRNTFQEDGSGMKDVPSWLKSLRLHKYAALFSQMSYEEMMTLTEQ
HLESQNVTKGARHKIALSIQKLRERQSVLKSLEKDVLEGGNLRNALQELQQIIITPIK
AYSVLQATVAAATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDPPAVENYPPP
PAPAPTDGSEPAPAPVADGDIPSQFTRVMGKVCTQLLVSRPDEENITSYLQLIEKCLT
HEAFTETQKKRLLSWKQQVLKLLRTFPRKAALEMQNYRQQKGWAFGSNSLPIAGSVGM
GVARRTQRQFPMPPRALPPGRMGLLSPSGIGGVSPRHALTSPQPWRPGPTEPVVCQPW
RQQQHAQSEPQLCAAHPLAPGPLVTPGHSHVPSRLPGSWA"
BASE COUNT 613 a 960 c 787 g 482 t
ORIGIN
1 gggcccgaga gggggcgacg gcggcggcgg tggcctgagg aggcccgagc ggcggcggtg
61 gcggcgaagg ccgaggcgga aactggagag gcgtggctgg accaagacct ccccccatgt
121 gagcaggctt cctcctcccc caacaaccgt tgccaccacg cccagaaacg tccttaagcc
181 ctggccctca ggggaaaggt aacaggaggc cagagccggg accatgtgac ggcgctggcc
241 ctcgccaccg ccgtcccccg accctggccc caggcccggc accatgatgt tccgagacca
301 ggtgggcatc ctcgctggct ggttcaaagg ctggaatgag tgtgagcaga cagtggccct
361 cctgtcactt ctgaaacggg tcacccgtac ccaggcccgc ttcctgcagc tctgcctgga
421 gcactcactg gcggactgca atgacatcca cctgctggag tcggaggcca acagtgctgc
481 catcgtcagc cagtggcagc aggagtccaa agagaaggtg gtgtccctcc tgctgtccca
541 ccttcccctg cttcagccag gcaacacaga ggccaagtcg gagtacatga ggctactgca
601 gaaagtgctg gcctactcaa tcgagagcaa tgctttcatc gaggagagtc gccagctgct
661 ttcctatgcc ctcatccacc cagccaccac actggaggac cgcaacgcac tggccctctg
721 gctgagccac ctggaagagc ggttggctag tggcttccgc tcccggccag agccctccta
781 ccattcacgt caaggctcag atgagtgggg gggccctgca gagctaggcc ctggggaggc
841 agggccaggc tggcaggaca agccaccccg ggaaaatgga cacgtgccct tccacccatc
901 cagctcagtg ccgccagcca tcaacagtat tgggagcaat gcaaacacag gtctcccctg
961 ccaaatccac cctagcccac tgaagcgctc catgtcactc atccctacaa gcccccaggt
1021 ccctggtgag tggccgagtc cagaggagct tggggcccgg gctgctttta ccacgcccga
1081 tcacgcacct ctctcgcccc agagcagcgt ggcctcctct ggcagtgagc agacagagga
1141 gcagggctcc agccggaaca ccttccagga ggatggcagt ggcatgaaag atgtgccctc
1201 atggctcaag agcctccgtt tgcacaagta tgcagccctc ttctcacaga tgagctacga
1261 ggagatgatg acactgactg agcagcacct ggagtctcag aacgtcacca aaggtgcccg
1321 ccacaagata gccctgagca tccagaagct gcgtgagaga cagagcgtcc tcaagtccct
1381 agagaaggat gtgctggaag gcgggaacct acgaaacgct ctgcaggagc tgcagcagat
1441 catcatcact cccatcaagg cctacagtgt cctccaggcc accgtggctg ccgccaccac
1501 cacccctact gccaaggatg gggccccggg ggaaccaccg ctgccaggtg ctgagcctcc
1561 cctagcccac cccggcacag acaaaggcac cgaggccaag gaccctccag ctgtggagaa
1621 ctacccacct ccaccagctc cagctcccac tgatggcagt gagcctgccc cggctcccgt
1681 cgccgacgga gacatcccca gccagtttac acgggtgatg ggcaaagtgt gcacccaact
1741 gctggtgtcc cgaccagacg aggagaacat caccagttac ctccagctca tcgaaaagtg
1801 cctgactcat gaggctttca cggagacgca gaagaaacgg ctgctatcct ggaaacagca
1861 agtgctgaag ctcctccgga cattcccgcg caaagccgca ctagagatgc agaactaccg
1921 gcagcagaaa ggctgggcat tcggctccaa ctcgctcccc atagctggct ctgtggggat
1981 gggagtggcc cggcgtaccc agcggcagtt cccaatgcct ccccgggccc tcccacccgg
2041 ccggatgggc ctcctgagcc cctcgggcat tgggggtgtc tcccctcgac atgccctcac
2101 cagcccccag ccttggaggc cagggccgac agaacctgtg gtttgccaac cctggaggca
2161 gcaacagcat gcccagtcag agccgcagct ctgtgcagcg cacccactcg ctcccggtcc
2221 actcgtcact ccaggccatt ctcatgttcc ctccagactg cccggttcct gggcctgacc
2281 tggagatcaa tcccactctg gagtctctgt gtctgagcat gacagaacac gccttgggtg
2341 gcccgtcgag ggatctctgc tgaggcccgg ggagttgggg gcagccagga taaagggggc
2401 agggactggc cagactgcct gcctctctcc tttccttcct catccccacc tggtcccatc
2461 ccacccctgc ctcctccaga ccgctgacca cctgcctctc cccaagggag cagactcccc
2521 agagacaaac tgaccactac cttgtggagc ctgctcagaa acatttgaca tttggggtga
2581 cgcgcagggc agagaacctg ccctccagaa tgttattgag aggagctggg gagaaggaag
2641 gggagcaagg agaggaagct ctctctcctc tccctgcttc cccttcacca ttccccacat
2701 tctgcaagga caggagccac cttcctctct ctcacctccc ctggccctgt tcaccagagg
2761 ttctctatga ttaatttctt aggcctattt aagatacata tttatatagt tcttaacggt
2821 taaaaaaaaa aaaaaaaaaa aa
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