LOCUS BC080629 3275 bp mRNA linear HUM 15-SEP-2004
DEFINITION Homo sapiens F-box protein, helicase, 18, mRNA (cDNA clone
IMAGE:6341718), partial cds.
ACCESSION BC080629
VERSION BC080629.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3275)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3275)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: k Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30795116.
FEATURES Location/Qualifiers
source 1..3275
/db_xref="H-InvDB:HIT000265893"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6341718"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_47"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3275
/gene="FBXO18"
/gene_synonym="FBH1"
/gene_synonym="Fbx18"
/gene_synonym="FLJ14590"
/db_xref="GeneID:84893"
/db_xref="MIM:607222"
CDS <1..2938
/gene="FBXO18"
/gene_synonym="FBH1"
/gene_synonym="Fbx18"
/gene_synonym="FLJ14590"
/codon_start=2
/product="FBXO18 protein"
/protein_id="AAH80629.1"
/db_xref="GeneID:84893"
/db_xref="MIM:607222"
/translation="AGKQPCTNDMAKSNSVGQDSCQDSEGDMIFPAESSCALPQEGSA
GPGSPGSAPPSRKRSWSSEEESNQATGTSRWDGVSKKAPRHHLSVPCTRPREARQEAE
DSTSRLSAESGETDQDAGDVGPDPIPDSYYGLLGTLPCQEALSHICSLPSEVLRHVFA
FLPVEDLYWNLSLVCHLWREIISDPLFIPWKKLYHRYLMNEEQAVSKVDGILSNCGIE
KESDLCVLNLIRYTATTKCSPSVDPERVLWSLRDHPLLPEAEACVRQHLPDLYAAAGG
VNIWALVAAVVLLSSSVNDIQRLLFCLRRPSSTVTMPDVTETLYCIAVLLYAMREKGI
NISNRIHYNIFYCLYLQENSCTQATKVKEEPSVWPGKKTIQLTHEQQLILNHKMEPLQ
VVKIMAFAGTGKTSTLVKYAEKWSQSRFLYVTFNKSIAKQAERVFPSNVICKTFHSMA
YGHIGRKYQSKKKLNLFKLTPFMVNSVLAEGKGGFIRAKLVCKTLENFFASADEELTI
DHVPIWCKNSQGQRVMVEQSEKLNGVLEASRLWDNMRKLGECTEEAHQMTHDGYLKLW
QLSKPSLASFDAIFVDEAQDCTPAIMNIVLSQPCGKIFVGDPHQQIYTFRGAVNALFT
VPHTHVFYLTQSFRFGVEIAYVGATILDVCKRVRKKTLVGGNHQSGIRGDAKGQVALL
SRTNANVFDEAVRVTEGEFPSRIHLIGGIKSFGLDRIIDIWILLQPEEERRKQNLVIK
DKFIRRWVHKEGFSGFKRYVTAAEDKELEAKIAVVEKYNIRIPELVQRIEKCHIEDLD
FAEYILGTVHKAKGLEFDTVHVLDDFVKVPCARHNLPQLPHFRVESFSEDEWNLLYVA
VTRAKKRLIMTKSLENILTLAGEYFLQAELTSNVLKTGVVRCCVGQCNNAIPVDTVLT
MKKLPITYSNRKENKGGYLCHSCAEQRIGPLAFLTASPEQVRAMERTVENIVLPRHEA
LLFLVF"
BASE COUNT 847 a 818 c 886 g 724 t
ORIGIN
1 agcaggcaag cagccgtgca ccaatgacat ggccaaaagc aattctgttg gccaggacag
61 ctgtcaggac tctgagggtg acatgatctt tcctgcagag agcagctgtg cactgcctca
121 ggaaggcagt gcagggccgg gctcaccagg gtctgccccg ccctccagga agcggtcttg
181 gtcctctgag gaagagagta accaggctac cgggaccagc cggtgggatg gagtttctaa
241 gaaagctcca cggcaccatt tgtctgtgcc atgcacaagg cctagggagg ccaggcaaga
301 agcagaggac agtacgtctc ggctctctgc ggagtctggt gaaaccgacc aagatgctgg
361 ggacgtgggt cctgatccca ttcctgactc atactatggg cttcttggga ccttgccctg
421 ccaggaagca ctgagccaca tttgcagcct gcctagtgag gtcctgaggc acgtgtttgc
481 cttcctcccg gtggaagacc tctattggaa cctgagcttg gtgtgccact tgtggaggga
541 gatcatcagt gacccgctgt tcattccttg gaagaagctg taccatcgat acctgatgaa
601 tgaagagcaa gctgtcagca aagtggacgg catcctgtct aactgtggca tagaaaagga
661 gtcagacctg tgtgtgctga acctcatacg atacacagcc accactaagt gctctccgag
721 tgtggatccc gagagggtgc tgtggagtct gagggaccac cccctcctcc ccgaggctga
781 ggcgtgtgtg cggcaacacc tccccgacct ctacgctgct gccgggggtg tcaacatctg
841 ggccctggtg gcggctgtgg tgctcctctc cagcagtgtg aatgacatcc agcgactgct
901 cttctgcctc cggagaccca gctccacggt gaccatgcca gatgtcaccg agaccctgta
961 ctgcatagcc gtgcttctct acgccatgag ggagaagggg attaacatca gcaataggat
1021 tcactacaac attttctatt gcctatatct tcaggagaat tcctgcactc aggccacaaa
1081 agttaaagag gagccatctg tctggccagg caagaaaacc atccaactta cacatgaaca
1141 acagctgatt ctgaatcaca agatggaacc tctccaggtg gtgaaaatta tggcctttgc
1201 cggcactggg aagacctcaa cgctggtcaa gtatgcagag aagtggtctc agagcaggtt
1261 tctgtatgtg acattcaaca agagcatcgc aaagcaggcc gaacgcgtct tccccagcaa
1321 cgtcatctgc aaaaccttcc actccatggc ctacgggcac atagggcgga agtaccagtc
1381 aaagaagaag ttgaatctct tcaagttaac acccttcatg gtcaactccg tccttgctga
1441 agggaagggt ggattcataa gagccaagct tgtgtgtaag actctagaaa acttctttgc
1501 ctcggctgac gaagagctga ccattgatca cgtgcctatt tggtgtaaga acagccaagg
1561 acagagagtc atggttgagc agagtgaaaa actgaatggt gtccttgaag cgagccgcct
1621 ctgggataac atgcggaagc tgggggagtg cacagaagag gcgcaccaga tgactcatga
1681 cggctacttg aaactctggc agctgagcaa gccttcgctg gcctcttttg acgccatctt
1741 tgtggatgag gcccaggact gcacaccagc tatcatgaac atagttctgt ctcagccatg
1801 tgggaaaatc tttgtagggg acccgcacca gcagatctat accttccggg gtgcggtcaa
1861 cgccctgttc acagtgcccc acacccacgt cttctatctc acgcagagtt ttcggtttgg
1921 tgtggaaata gcttatgtgg gagctactat cttggatgtt tgcaagagag tcaggaaaaa
1981 gactttggtt ggaggaaacc atcagagtgg cattagaggt gacgcaaagg ggcaagtggc
2041 cttgttgtcc cggaccaacg ccaacgtgtt tgatgaggcc gtacgggtga cggaagggga
2101 attcccttca aggatacatt tgattggggg gattaaatca tttggattgg acagaatcat
2161 tgatatttgg atccttcttc agccagagga agaacggagg aaacaaaacc tcgtcattaa
2221 agacaaattt atcagaagat gggtgcacaa agaaggcttt agtggcttca agaggtatgt
2281 gaccgctgcc gaggacaagg agcttgaagc caagatcgca gttgttgaaa agtataacat
2341 caggattcca gagctggtgc aaaggataga aaaatgccat atagaagatt tggactttgc
2401 agagtacatt ctgggcactg tgcacaaagc caaaggcctg gagtttgaca ctgtgcatgt
2461 tttggatgat tttgtgaaag tgccttgtgc ccggcataac ctgccccagc ttccgcactt
2521 cagagttgag tcattttctg aggatgaatg gaatttactg tatgttgcag taactcgagc
2581 caagaagcgt ctcatcatga ccaaatcatt ggaaaacatt ttgactttgg ctggggagta
2641 cttcttgcaa gcagagctga caagcaacgt cttaaaaaca ggcgtggtgc gctgctgcgt
2701 gggacagtgc aacaatgcca tccctgttga caccgtcctt accatgaaga agctgcccat
2761 cacctatagc aacaggaagg aaaacaaggg gggctacctc tgccactcct gtgcggagca
2821 gcgcatcggg cccctggcgt tcctgacagc ctccccggag caggtgcgcg ccatggagcg
2881 cactgtggag aacatcgtac tgccccggca tgaggccctg ctcttcctcg tcttctgagg
2941 acaaggcgca cgttctccgc agtgcagagc agcttgccga ggaccccgcg tgaagaaagc
3001 cagcgagggg ggcttctgct ccctgagact ctgggttcac ccacagcact ttctgaggaa
3061 gaggacacca gcccaagctg gacctgccat ttctccactc cctacagaca gccagtctcc
3121 acttgcctcc cctctggatg tatctggtca gggaagtggg ggatgttctt ttgataaaaa
3181 aaaaaaaaat tttatgtatt taaactttta ttacaagatt tcaattaaac aggcaccata
3241 gcactggcaa aaaaaaaaaa aaaaaaaaaa aaaaa
//