LOCUS BC080621 925 bp mRNA linear HUM 13-DEC-2004
DEFINITION Homo sapiens deoxyribonuclease II beta, mRNA (cDNA clone
IMAGE:6262400), partial cds.
ACCESSION BC080621
VERSION BC080621.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 925)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 925)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: i Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17402881.
FEATURES Location/Qualifiers
source 1..925
/db_xref="H-InvDB:HIT000265885"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6262400"
/tissue_type="Skin, melanoma, melanotic"
/clone_lib="NIH_MGC_112"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..925
/gene="DNASE2B"
/gene_synonym="DLAD"
/db_xref="GeneID:58511"
/db_xref="MIM:608057"
CDS <1..757
/gene="DNASE2B"
/gene_synonym="DLAD"
/codon_start=2
/product="DNASE2B protein"
/protein_id="AAH80621.1"
/db_xref="GeneID:58511"
/db_xref="MIM:608057"
/translation="NDGVPKPVNYSRKYGHTKGLLLWNRVQGFWLIHSIPQFPPIPEE
GYDYPPTGRRNGQSGICITFKYNQYEAIDSQLLVCNPNVYSCSIPATFHQELIHMPQL
CTRASSSEIPGRLLTTLQSAQGQKFLHFAKSDSFLDDIFAAWMAQRLKTHLLTETWQR
KRQELPSNCSLPYHVYNIKAIKLSRHSYFSSYQDHAKWCISQKGTKNRWTCIGDLNRS
PHQAFRSGGFICTQNWQIYQAFQGLVLYYESCK"
BASE COUNT 292 a 226 c 166 g 241 t
ORIGIN
1 caatgatgga gtccctaaac ctgtgaatta cagcagaaag tatggacaca ccaaaggttt
61 actgctgtgg aacagagttc aagggttctg gctgattcat tccatccctc agtttcctcc
121 aattccggaa gaaggctatg attatccacc cacagggaga cgaaatggac aaagtggcat
181 ctgcataact ttcaagtaca accagtatga ggcaatagat tctcagctct tggtctgcaa
241 ccccaacgtc tatagctgct ccatcccagc cacctttcac caggagctca ttcacatgcc
301 ccagctgtgc accagggcca gctcatcaga gattcctggc aggctcctca ccacacttca
361 gtcggcccag ggacaaaaat tcctccattt tgcaaagtcg gattcttttc ttgacgacat
421 ctttgcagcc tggatggctc aacggctgaa gacacacttg ttaacagaaa cctggcagcg
481 aaaaagacaa gagcttcctt caaactgctc ccttccttac catgtctaca atataaaagc
541 aattaaatta tcacgacact cttatttcag ttcttatcaa gatcacgcca agtggtgtat
601 ttcccaaaag ggcaccaaaa atcgctggac atgtattgga gacctaaatc ggagtccaca
661 ccaagccttc agaagtggag gattcatttg tacccagaat tggcaaattt accaagcatt
721 tcaaggatta gtattatact atgaaagctg taagtaaact tggtgaaagg acacaggtac
781 tatcattgaa aaccttgaca atgggtcttc ttccattaca ccttctttat attttaaagg
841 cctgtgaata tacttataac ctgcatatca caaaataaaa catttttctc tcatgtttac
901 catttaacaa aaaaaaaaaa aaaaa
//